Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
VCLP18206 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCLP18206 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCLP18206 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.09■□□□□ 0.81
VCLP18206 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.09■□□□□ 0.81
VCLP18206 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.08■□□□□ 0.81
VCLP18206 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VCLP18206 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
VCLP18206 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.08■□□□□ 0.81
VCLP18206 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.08■□□□□ 0.81
VCLP18206 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VCLP18206 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.08■□□□□ 0.81
VCLP18206 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.08■□□□□ 0.81
VCLP18206 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
VCLP18206 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VCLP18206 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.08■□□□□ 0.8
VCLP18206 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
VCLP18206 AC073314.1-201ENST00000568729 2216 ntBASIC20.08■□□□□ 0.8
VCLP18206 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
VCLP18206 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.08■□□□□ 0.8
VCLP18206 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.08■□□□□ 0.8
VCLP18206 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
VCLP18206 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
VCLP18206 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.08■□□□□ 0.8
VCLP18206 AC027702.1-201ENST00000563810 1770 ntBASIC20.08■□□□□ 0.8
VCLP18206 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VCLP18206 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 GABARAPL3-202ENST00000624044 1851 ntBASIC20.07■□□□□ 0.8
VCLP18206 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
VCLP18206 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
VCLP18206 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.07■□□□□ 0.8
VCLP18206 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.07■□□□□ 0.8
VCLP18206 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
VCLP18206 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.07■□□□□ 0.8
VCLP18206 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VCLP18206 PCDHAC2-203ENST00000615316 3011 ntBASIC20.07■□□□□ 0.8
VCLP18206 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.07■□□□□ 0.8
VCLP18206 KRT17P1-201ENST00000399211 1546 ntBASIC20.07■□□□□ 0.8
VCLP18206 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VCLP18206 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.06■□□□□ 0.8
VCLP18206 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VCLP18206 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
VCLP18206 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
VCLP18206 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
VCLP18206 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.06■□□□□ 0.8
VCLP18206 DUSP5P2-201ENST00000426873 1033 ntBASIC20.06■□□□□ 0.8
VCLP18206 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VCLP18206 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
VCLP18206 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
VCLP18206 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.06■□□□□ 0.8
VCLP18206 AC105020.6-201ENST00000621523 1217 ntBASIC20.06■□□□□ 0.8
VCLP18206 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
VCLP18206 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VCLP18206 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
VCLP18206 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
VCLP18206 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VCLP18206 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VCLP18206 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
VCLP18206 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VCLP18206 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
VCLP18206 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VCLP18206 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
VCLP18206 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.05■□□□□ 0.8
VCLP18206 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCLP18206 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
VCLP18206 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCLP18206 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCLP18206 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.05■□□□□ 0.8
VCLP18206 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
VCLP18206 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.05■□□□□ 0.8
VCLP18206 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
VCLP18206 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.05■□□□□ 0.8
VCLP18206 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VCLP18206 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.05■□□□□ 0.8
VCLP18206 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VCLP18206 AC091874.3-201ENST00000512672 1195 ntBASIC20.05■□□□□ 0.8
VCLP18206 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.05■□□□□ 0.8
VCLP18206 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
VCLP18206 AL356652.1-201ENST00000615962 565 ntBASIC20.05■□□□□ 0.8
VCLP18206 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
VCLP18206 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCLP18206 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCLP18206 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.05■□□□□ 0.8
VCLP18206 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VCLP18206 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
VCLP18206 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms