Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.24■□□□□ 0.99
CCDC130P13994 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC130P13994 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC130P13994 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC130P13994 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC130P13994 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC130P13994 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC130P13994 AC233263.1-201ENST00000578059 224 ntBASIC21.23■□□□□ 0.99
CCDC130P13994 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.23■□□□□ 0.99
CCDC130P13994 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.23■□□□□ 0.99
CCDC130P13994 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC130P13994 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC130P13994 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CCDC130P13994 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
CCDC130P13994 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC130P13994 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC130P13994 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC130P13994 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC130P13994 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC130P13994 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC130P13994 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.23■□□□□ 0.99
CCDC130P13994 AC124283.5-201ENST00000624661 1809 ntBASIC21.22■□□□□ 0.99
CCDC130P13994 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC130P13994 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC130P13994 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC130P13994 SLC25A24-204ENST00000569674 2357 ntBASIC21.22■□□□□ 0.99
CCDC130P13994 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC130P13994 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC130P13994 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC130P13994 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC130P13994 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC130P13994 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC130P13994 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC130P13994 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC130P13994 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC130P13994 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC130P13994 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC130P13994 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC130P13994 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC130P13994 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC130P13994 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC130P13994 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC130P13994 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC130P13994 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC130P13994 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC130P13994 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC130P13994 HLA-G-202ENST00000376815 851 ntBASIC21.21■□□□□ 0.99
CCDC130P13994 HLA-G-203ENST00000376818 1127 ntBASIC21.21■□□□□ 0.99
CCDC130P13994 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC130P13994 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.21■□□□□ 0.99
CCDC130P13994 AC128676.1-201ENST00000454392 318 ntBASIC21.21■□□□□ 0.99
CCDC130P13994 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC130P13994 AC120498.8-201ENST00000614275 531 ntBASIC21.21■□□□□ 0.99
CCDC130P13994 ITM2C-210ENST00000620962 501 ntBASIC21.21■□□□□ 0.99
CCDC130P13994 AC073648.6-201ENST00000641589 218 ntBASIC21.21■□□□□ 0.99
CCDC130P13994 AL391422.3-201ENST00000603791 2761 ntBASIC21.21■□□□□ 0.99
CCDC130P13994 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CCDC130P13994 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC130P13994 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC130P13994 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.2■□□□□ 0.99
CCDC130P13994 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CCDC130P13994 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC130P13994 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC130P13994 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC130P13994 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
CCDC130P13994 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC130P13994 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC130P13994 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC130P13994 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC130P13994 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC130P13994 KRT18P29-201ENST00000397031 1267 ntBASIC21.2■□□□□ 0.98
CCDC130P13994 POM121L13P-201ENST00000422362 380 ntBASIC21.2■□□□□ 0.98
CCDC130P13994 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC130P13994 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC130P13994 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC130P13994 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CCDC130P13994 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC130P13994 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC130P13994 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC130P13994 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC130P13994 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC130P13994 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC130P13994 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCDC130P13994 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC130P13994 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCDC130P13994 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC130P13994 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.19■□□□□ 0.98
CCDC130P13994 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC130P13994 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC130P13994 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC130P13994 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC130P13994 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC130P13994 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC130P13994 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC130P13994 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCDC130P13994 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC130P13994 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC130P13994 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC130P13994 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC130P13994 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms