Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.97■□□□□ 0.47
HLA-DOBP13765 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DOBP13765 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DOBP13765 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DOBP13765 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HLA-DOBP13765 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DOBP13765 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DOBP13765 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.96■□□□□ 0.47
HLA-DOBP13765 NCF1B-203ENST00000435988 1254 ntBASIC17.96■□□□□ 0.47
HLA-DOBP13765 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
HLA-DOBP13765 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-DOBP13765 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DOBP13765 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
HLA-DOBP13765 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DOBP13765 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DOBP13765 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DOBP13765 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-DOBP13765 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.96■□□□□ 0.47
HLA-DOBP13765 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
HLA-DOBP13765 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DOBP13765 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DOBP13765 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DOBP13765 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DOBP13765 AL691432.2-201ENST00000607222 2038 ntBASIC17.95■□□□□ 0.46
HLA-DOBP13765 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
HLA-DOBP13765 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DOBP13765 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DOBP13765 GUSBP6-202ENST00000438529 1198 ntBASIC17.95■□□□□ 0.46
HLA-DOBP13765 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
HLA-DOBP13765 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DOBP13765 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DOBP13765 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.95■□□□□ 0.46
HLA-DOBP13765 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DOBP13765 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DOBP13765 C2orf69P4-201ENST00000565394 541 ntBASIC17.95■□□□□ 0.46
HLA-DOBP13765 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.95■□□□□ 0.46
HLA-DOBP13765 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DOBP13765 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DOBP13765 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HLA-DOBP13765 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DOBP13765 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DOBP13765 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DOBP13765 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DOBP13765 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DOBP13765 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DOBP13765 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DOBP13765 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DOBP13765 BX119927.1-201ENST00000636596 1552 ntBASIC17.95■□□□□ 0.46
HLA-DOBP13765 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HLA-DOBP13765 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DOBP13765 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOBP13765 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
HLA-DOBP13765 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOBP13765 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOBP13765 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOBP13765 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOBP13765 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOBP13765 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOBP13765 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOBP13765 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOBP13765 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOBP13765 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOBP13765 MIPEPP3-201ENST00000412105 444 ntBASIC17.94■□□□□ 0.46
HLA-DOBP13765 AC090192.1-201ENST00000517740 490 ntBASIC17.94■□□□□ 0.46
HLA-DOBP13765 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DOBP13765 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HLA-DOBP13765 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HLA-DOBP13765 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DOBP13765 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DOBP13765 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOBP13765 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HLA-DOBP13765 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
HLA-DOBP13765 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DOBP13765 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOBP13765 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HLA-DOBP13765 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DOBP13765 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOBP13765 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HLA-DOBP13765 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HLA-DOBP13765 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOBP13765 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOBP13765 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOBP13765 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOBP13765 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DOBP13765 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.93■□□□□ 0.46
HLA-DOBP13765 GPX1P1-201ENST00000388829 606 ntBASIC17.93■□□□□ 0.46
HLA-DOBP13765 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DOBP13765 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HLA-DOBP13765 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.93■□□□□ 0.46
HLA-DOBP13765 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOBP13765 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOBP13765 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOBP13765 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
HLA-DOBP13765 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOBP13765 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOBP13765 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DOBP13765 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DOBP13765 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOBP13765 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOBP13765 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms