Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC35.33■■■■□ 3.25
TOP2AP11388 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC35.33■■■■□ 3.25
TOP2AP11388 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC35.33■■■■□ 3.25
TOP2AP11388 AC010203.1-204ENST00000548782 407 ntBASIC35.33■■■■□ 3.25
TOP2AP11388 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
TOP2AP11388 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
TOP2AP11388 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC35.33■■■■□ 3.25
TOP2AP11388 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC35.33■■■■□ 3.25
TOP2AP11388 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC35.33■■■■□ 3.25
TOP2AP11388 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC35.33■■■■□ 3.25
TOP2AP11388 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC35.33■■■■□ 3.25
TOP2AP11388 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
TOP2AP11388 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC35.32■■■■□ 3.25
TOP2AP11388 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC35.32■■■■□ 3.25
TOP2AP11388 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC35.32■■■■□ 3.25
TOP2AP11388 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC35.32■■■■□ 3.25
TOP2AP11388 YBX1P10-201ENST00000444752 975 ntBASIC35.32■■■■□ 3.25
TOP2AP11388 B3GAT3P1-201ENST00000471720 806 ntBASIC35.32■■■■□ 3.25
TOP2AP11388 TPM1-226ENST00000560959 925 ntTSL 2 BASIC35.32■■■■□ 3.25
TOP2AP11388 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC35.32■■■■□ 3.25
TOP2AP11388 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC35.32■■■■□ 3.25
TOP2AP11388 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC35.32■■■■□ 3.24
TOP2AP11388 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC35.32■■■■□ 3.24
TOP2AP11388 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC35.32■■■■□ 3.24
TOP2AP11388 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
TOP2AP11388 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC35.32■■■■□ 3.24
TOP2AP11388 TMA16-209ENST00000513272 803 ntTSL 2 BASIC35.32■■■■□ 3.24
TOP2AP11388 LTBR-211ENST00000543190 785 ntTSL 3 BASIC35.32■■■■□ 3.24
TOP2AP11388 CFL2-205ENST00000555765 632 ntTSL 2 BASIC35.32■■■■□ 3.24
TOP2AP11388 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC35.31■■■■□ 3.24
TOP2AP11388 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC35.31■■■■□ 3.24
TOP2AP11388 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC35.31■■■■□ 3.24
TOP2AP11388 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
TOP2AP11388 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC35.31■■■■□ 3.24
TOP2AP11388 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC35.31■■■■□ 3.24
TOP2AP11388 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC35.31■■■■□ 3.24
TOP2AP11388 AL121603.2-201ENST00000557373 2117 ntBASIC35.31■■■■□ 3.24
TOP2AP11388 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC35.3■■■■□ 3.24
TOP2AP11388 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
TOP2AP11388 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC35.3■■■■□ 3.24
TOP2AP11388 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
TOP2AP11388 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC35.3■■■■□ 3.24
TOP2AP11388 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC35.3■■■■□ 3.24
TOP2AP11388 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC35.3■■■■□ 3.24
TOP2AP11388 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC35.3■■■■□ 3.24
TOP2AP11388 AL031985.4-201ENST00000642138 673 ntBASIC35.3■■■■□ 3.24
TOP2AP11388 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC35.29■■■■□ 3.24
TOP2AP11388 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
TOP2AP11388 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC35.29■■■■□ 3.24
TOP2AP11388 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC35.29■■■■□ 3.24
TOP2AP11388 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC35.29■■■■□ 3.24
TOP2AP11388 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC35.29■■■■□ 3.24
TOP2AP11388 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC35.29■■■■□ 3.24
TOP2AP11388 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC35.29■■■■□ 3.24
TOP2AP11388 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
TOP2AP11388 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC35.28■■■■□ 3.24
TOP2AP11388 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
TOP2AP11388 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
TOP2AP11388 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC35.28■■■■□ 3.24
TOP2AP11388 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC35.28■■■■□ 3.24
TOP2AP11388 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC35.28■■■■□ 3.24
TOP2AP11388 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC35.28■■■■□ 3.24
TOP2AP11388 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC35.28■■■■□ 3.24
TOP2AP11388 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
TOP2AP11388 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC35.27■■■■□ 3.24
TOP2AP11388 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC35.27■■■■□ 3.24
TOP2AP11388 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC35.27■■■■□ 3.24
TOP2AP11388 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
TOP2AP11388 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
TOP2AP11388 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
TOP2AP11388 ARMC10P1-201ENST00000313754 855 ntBASIC35.27■■■■□ 3.24
TOP2AP11388 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
TOP2AP11388 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
TOP2AP11388 AC004980.1-204ENST00000429707 299 ntBASIC35.27■■■■□ 3.24
TOP2AP11388 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
TOP2AP11388 RMI2-205ENST00000576027 818 ntTSL 2 BASIC35.27■■■■□ 3.24
TOP2AP11388 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC35.27■■■■□ 3.24
TOP2AP11388 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC35.27■■■■□ 3.24
TOP2AP11388 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
TOP2AP11388 AC121338.2-201ENST00000622535 1744 ntBASIC35.26■■■■□ 3.24
TOP2AP11388 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC35.26■■■■□ 3.23
TOP2AP11388 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC35.26■■■■□ 3.23
TOP2AP11388 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
TOP2AP11388 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC35.26■■■■□ 3.23
TOP2AP11388 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
TOP2AP11388 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC35.26■■■■□ 3.23
TOP2AP11388 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC35.26■■■■□ 3.23
TOP2AP11388 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC35.26■■■■□ 3.23
TOP2AP11388 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC35.26■■■■□ 3.23
TOP2AP11388 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC35.26■■■■□ 3.23
TOP2AP11388 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
TOP2AP11388 AC116351.2-201ENST00000606540 1585 ntBASIC35.26■■■■□ 3.23
TOP2AP11388 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC35.26■■■■□ 3.23
TOP2AP11388 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC35.25■■■■□ 3.23
TOP2AP11388 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC35.25■■■■□ 3.23
TOP2AP11388 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
TOP2AP11388 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
TOP2AP11388 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC35.24■■■■□ 3.23
TOP2AP11388 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC35.24■■■■□ 3.23
TOP2AP11388 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms