Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.54■□□□□ 0.4
UBCP0CG48 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBCP0CG48 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
UBCP0CG48 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBCP0CG48 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UBCP0CG48 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.53■□□□□ 0.4
UBCP0CG48 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UBCP0CG48 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.53■□□□□ 0.4
UBCP0CG48 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.53■□□□□ 0.4
UBCP0CG48 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.53■□□□□ 0.4
UBCP0CG48 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.53■□□□□ 0.4
UBCP0CG48 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 AL356652.1-201ENST00000615962 565 ntBASIC17.53■□□□□ 0.4
UBCP0CG48 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.53■□□□□ 0.4
UBCP0CG48 MYCNOS-205ENST00000641950 531 ntBASIC17.53■□□□□ 0.4
UBCP0CG48 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UBCP0CG48 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UBCP0CG48 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBCP0CG48 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBCP0CG48 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
UBCP0CG48 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBCP0CG48 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.52■□□□□ 0.4
UBCP0CG48 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBCP0CG48 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBCP0CG48 AL691432.2-201ENST00000607222 2038 ntBASIC17.52■□□□□ 0.4
UBCP0CG48 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBCP0CG48 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBCP0CG48 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.52■□□□□ 0.4
UBCP0CG48 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.52■□□□□ 0.4
UBCP0CG48 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
UBCP0CG48 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.52■□□□□ 0.4
UBCP0CG48 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBCP0CG48 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.52■□□□□ 0.4
UBCP0CG48 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBCP0CG48 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBCP0CG48 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.52■□□□□ 0.4
UBCP0CG48 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBCP0CG48 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.52■□□□□ 0.4
UBCP0CG48 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBCP0CG48 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
UBCP0CG48 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBCP0CG48 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.52■□□□□ 0.39
UBCP0CG48 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.52■□□□□ 0.39
UBCP0CG48 AC125437.2-201ENST00000625180 2167 ntBASIC17.52■□□□□ 0.39
UBCP0CG48 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBCP0CG48 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
UBCP0CG48 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
UBCP0CG48 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBCP0CG48 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.51■□□□□ 0.39
UBCP0CG48 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.51■□□□□ 0.39
UBCP0CG48 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBCP0CG48 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBCP0CG48 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBCP0CG48 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBCP0CG48 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBCP0CG48 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.51■□□□□ 0.39
UBCP0CG48 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBCP0CG48 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBCP0CG48 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
UBCP0CG48 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.51■□□□□ 0.39
UBCP0CG48 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
UBCP0CG48 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBCP0CG48 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBCP0CG48 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.51■□□□□ 0.39
UBCP0CG48 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBCP0CG48 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBCP0CG48 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBCP0CG48 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBCP0CG48 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
UBCP0CG48 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.5■□□□□ 0.39
UBCP0CG48 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBCP0CG48 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.5■□□□□ 0.39
UBCP0CG48 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBCP0CG48 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBCP0CG48 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.5■□□□□ 0.39
UBCP0CG48 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBCP0CG48 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBCP0CG48 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UBCP0CG48 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.5■□□□□ 0.39
UBCP0CG48 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms