Protein–RNA interactions for Protein: P0C2I4

TY1A-H, Transposon Ty1-H Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-HP0C2I4 YOR142W-BYOR142W-B 5268 nt2.55□□□□□ -2
TY1A-HP0C2I4 YPL257W-BYPL257W-B 5268 nt2.55□□□□□ -2
TY1A-HP0C2I4 YPR158W-BYPR158W-B 5271 nt2.55□□□□□ -2
TY1A-HP0C2I4 SFB2YNL049C 2631 nt2.55□□□□□ -2
TY1A-HP0C2I4 NUP157YER105C 4176 nt2.54□□□□□ -2
TY1A-HP0C2I4 FLO11YIR019C 4104 nt2.54□□□□□ -2
TY1A-HP0C2I4 YHR086W-AYHR086W-A 162 nt2.54□□□□□ -2
TY1A-HP0C2I4 YOR343W-BYOR343W-B 5313 nt2.54□□□□□ -2
TY1A-HP0C2I4 ECM29YHL030W 5607 nt2.54□□□□□ -2
TY1A-HP0C2I4 TOR1YJR066W 7413 nt2.53□□□□□ -2
TY1A-HP0C2I4 MMS4YBR098W 2076 nt2.53□□□□□ -2
TY1A-HP0C2I4 NOP9YJL010C 2001 nt2.53□□□□□ -2
TY1A-HP0C2I4 RAD9YDR217C 3930 nt2.53□□□□□ -2
TY1A-HP0C2I4 RPS29AYLR388W 171 nt2.53□□□□□ -2
TY1A-HP0C2I4 PDR3YBL005W 2931 nt2.53□□□□□ -2
TY1A-HP0C2I4 SAP1YER047C 2694 nt2.53□□□□□ -2.01
TY1A-HP0C2I4 tF(GAA)DtF(GAA)D 73 nt2.52□□□□□ -2.01
TY1A-HP0C2I4 tF(GAA)NtF(GAA)N 73 nt2.52□□□□□ -2.01
TY1A-HP0C2I4 SSD1YDR293C 3753 nt2.52□□□□□ -2.01
TY1A-HP0C2I4 CHC1YGL206C 4962 nt2.52□□□□□ -2.01
TY1A-HP0C2I4 BNR1YIL159W 4128 nt2.51□□□□□ -2.01
TY1A-HP0C2I4 YKL225WYKL225W 348 nt2.51□□□□□ -2.01
TY1A-HP0C2I4 CHS1YNL192W 3396 nt2.5□□□□□ -2.01
TY1A-HP0C2I4 tK(UUU)DtK(UUU)D 73 nt2.5□□□□□ -2.01
TY1A-HP0C2I4 tK(UUU)G1tK(UUU)G1 73 nt2.5□□□□□ -2.01
TY1A-HP0C2I4 tK(UUU)G2tK(UUU)G2 73 nt2.5□□□□□ -2.01
TY1A-HP0C2I4 tK(UUU)KtK(UUU)K 73 nt2.5□□□□□ -2.01
TY1A-HP0C2I4 tK(UUU)LtK(UUU)L 73 nt2.5□□□□□ -2.01
TY1A-HP0C2I4 tK(UUU)OtK(UUU)O 73 nt2.5□□□□□ -2.01
TY1A-HP0C2I4 tK(UUU)PtK(UUU)P 73 nt2.5□□□□□ -2.01
TY1A-HP0C2I4 NAB6YML117W 3405 nt2.49□□□□□ -2.01
TY1A-HP0C2I4 GIP3YPL137C 3831 nt2.48□□□□□ -2.01
TY1A-HP0C2I4 YLR149C-AYLR149C-A 87 nt2.48□□□□□ -2.01
TY1A-HP0C2I4 RGA1YOR127W 3024 nt2.48□□□□□ -2.01
TY1A-HP0C2I4 FAR11YNL127W 2862 nt2.47□□□□□ -2.01
TY1A-HP0C2I4 RPL26BYGR034W 384 nt2.47□□□□□ -2.01
TY1A-HP0C2I4 LCL1YPL056C 306 nt2.47□□□□□ -2.01
TY1A-HP0C2I4 snR190snR190 190 nt2.47□□□□□ -2.01
TY1A-HP0C2I4 BPT1YLL015W 4680 nt2.47□□□□□ -2.01
TY1A-HP0C2I4 GEA1YJR031C 4227 nt2.46□□□□□ -2.02
TY1A-HP0C2I4 MBB1YJL199C 327 nt2.46□□□□□ -2.02
TY1A-HP0C2I4 YMR122W-AYMR122W-A 255 nt2.46□□□□□ -2.02
TY1A-HP0C2I4 UTP21YLR409C 2820 nt2.46□□□□□ -2.02
TY1A-HP0C2I4 YAR009CYAR009C 3591 nt2.46□□□□□ -2.02
TY1A-HP0C2I4 CYR1YJL005W 6081 nt2.45□□□□□ -2.02
TY1A-HP0C2I4 NUT1YGL151W 3399 nt2.45□□□□□ -2.02
TY1A-HP0C2I4 ROM2YLR371W 4071 nt2.45□□□□□ -2.02
TY1A-HP0C2I4 WAR1YML076C 2835 nt2.45□□□□□ -2.02
TY1A-HP0C2I4 RTT101YJL047C 2529 nt2.44□□□□□ -2.02
TY1A-HP0C2I4 SLN1YIL147C 3663 nt2.44□□□□□ -2.02
TY1A-HP0C2I4 REV3YPL167C 4515 nt2.43□□□□□ -2.02
TY1A-HP0C2I4 RAD50YNL250W 3939 nt2.42□□□□□ -2.02
TY1A-HP0C2I4 AZF1YOR113W 2745 nt2.42□□□□□ -2.02
TY1A-HP0C2I4 SRB8YCR081W 4284 nt2.42□□□□□ -2.02
TY1A-HP0C2I4 BEM3YPL115C 3387 nt2.41□□□□□ -2.02
TY1A-HP0C2I4 UBP3YER151C 2739 nt2.41□□□□□ -2.02
TY1A-HP0C2I4 TOP2YNL088W 4287 nt2.41□□□□□ -2.02
TY1A-HP0C2I4 TRA1YHR099W 11235 nt2.41□□□□□ -2.02
TY1A-HP0C2I4 ESC1YMR219W 4977 nt2.4□□□□□ -2.02
TY1A-HP0C2I4 KIP1YBL063W 3336 nt2.4□□□□□ -2.03
TY1A-HP0C2I4 YDR209CYDR209C 414 nt2.4□□□□□ -2.03
TY1A-HP0C2I4 HIR3YJR140C 4947 nt2.4□□□□□ -2.03
TY1A-HP0C2I4 RAV1YJR033C 4074 nt2.39□□□□□ -2.03
TY1A-HP0C2I4 tQ(UUG)BtQ(UUG)B 72 nt2.39□□□□□ -2.03
TY1A-HP0C2I4 YLR299C-AYLR299C-A 93 nt2.39□□□□□ -2.03
TY1A-HP0C2I4 TDA9YML081W 3756 nt2.39□□□□□ -2.03
TY1A-HP0C2I4 MSH6YDR097C 3729 nt2.39□□□□□ -2.03
TY1A-HP0C2I4 tD(GUC)QtD(GUC)Q 75 nt2.38□□□□□ -2.03
TY1A-HP0C2I4 YJL052C-AYJL052C-A 120 nt2.38□□□□□ -2.03
TY1A-HP0C2I4 HSL1YKL101W 4557 nt2.38□□□□□ -2.03
TY1A-HP0C2I4 PIK1YNL267W 3201 nt2.37□□□□□ -2.03
TY1A-HP0C2I4 ANS1YHR126C 480 nt2.37□□□□□ -2.03
TY1A-HP0C2I4 EMC5YIL027C 426 nt2.35□□□□□ -2.03
TY1A-HP0C2I4 SGS1YMR190C 4344 nt2.35□□□□□ -2.03
TY1A-HP0C2I4 YDL073WYDL073W 2955 nt2.34□□□□□ -2.03
TY1A-HP0C2I4 HER1YOR227W 3741 nt2.34□□□□□ -2.04
TY1A-HP0C2I4 KRE33YNL132W 3171 nt2.34□□□□□ -2.04
TY1A-HP0C2I4 KOG1YHR186C 4674 nt2.33□□□□□ -2.04
TY1A-HP0C2I4 NNF2YGR089W 2811 nt2.32□□□□□ -2.04
TY1A-HP0C2I4 MSB2YGR014W 3921 nt2.32□□□□□ -2.04
TY1A-HP0C2I4 NUM1YDR150W 8247 nt2.3□□□□□ -2.04
TY1A-HP0C2I4 RPL41AYDL184C 78 nt2.3□□□□□ -2.04
TY1A-HP0C2I4 PRP16YKR086W 3216 nt2.29□□□□□ -2.04
TY1A-HP0C2I4 SKI7YOR076C 2244 nt2.29□□□□□ -2.04
TY1A-HP0C2I4 AXL1YPR122W 3627 nt2.29□□□□□ -2.04
TY1A-HP0C2I4 BRE1YDL074C 2103 nt2.29□□□□□ -2.04
TY1A-HP0C2I4 RGC1YPR115W 3252 nt2.28□□□□□ -2.04
TY1A-HP0C2I4 snR70snR70 164 nt2.28□□□□□ -2.04
TY1A-HP0C2I4 ESL2YKR096W 3588 nt2.28□□□□□ -2.04
TY1A-HP0C2I4 PSD2YGR170W 3417 nt2.27□□□□□ -2.05
TY1A-HP0C2I4 MYO4YAL029C 4416 nt2.27□□□□□ -2.05
TY1A-HP0C2I4 YDL159C-BYDL159C-B 177 nt2.27□□□□□ -2.05
TY1A-HP0C2I4 YHR180C-BYHR180C-B 105 nt2.27□□□□□ -2.05
TY1A-HP0C2I4 YDL159W-AYDL159W-A 132 nt2.26□□□□□ -2.05
TY1A-HP0C2I4 MGA2YIR033W 3342 nt2.26□□□□□ -2.05
TY1A-HP0C2I4 SPF1YEL031W 3648 nt2.24□□□□□ -2.05
TY1A-HP0C2I4 STO1YMR125W 2586 nt2.24□□□□□ -2.05
TY1A-HP0C2I4 YLR422WYLR422W 5799 nt2.23□□□□□ -2.05
TY1A-HP0C2I4 YIL169CYIL169C 2988 nt2.22□□□□□ -2.05
TY1A-HP0C2I4 YOR296WYOR296W 3870 nt2.22□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 34.6 ms