Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 AL691432.2-201ENST00000607222 2038 ntBASIC20.35■□□□□ 0.85
HLA-DQB2P05538 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQB2P05538 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HLA-DQB2P05538 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DQB2P05538 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HLA-DQB2P05538 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DQB2P05538 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DQB2P05538 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DQB2P05538 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DQB2P05538 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DQB2P05538 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.33■□□□□ 0.85
HLA-DQB2P05538 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.33■□□□□ 0.85
HLA-DQB2P05538 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.33■□□□□ 0.85
HLA-DQB2P05538 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.33■□□□□ 0.85
HLA-DQB2P05538 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-DQB2P05538 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-DQB2P05538 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-DQB2P05538 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-DQB2P05538 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-DQB2P05538 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.33■□□□□ 0.84
HLA-DQB2P05538 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-DQB2P05538 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 HLA-G-202ENST00000376815 851 ntBASIC20.32■□□□□ 0.84
HLA-DQB2P05538 HLA-G-203ENST00000376818 1127 ntBASIC20.32■□□□□ 0.84
HLA-DQB2P05538 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQB2P05538 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms