Protein–RNA interactions for Protein: P05318

RPP1A, 60S acidic ribosomal protein P1-alpha, yeastyeast

Predicted RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPP1AP05318 YJL127W-AYJL127W-A 117 nt2.2□□□□□ -2.06
RPP1AP05318 snR14snR14 160 nt2.2□□□□□ -2.06
RPP1AP05318 SEC21YNL287W 2808 nt2.19□□□□□ -2.06
RPP1AP05318 SET3YKR029C 2256 nt2.19□□□□□ -2.06
RPP1AP05318 YJL052C-AYJL052C-A 120 nt2.19□□□□□ -2.06
RPP1AP05318 MYO4YAL029C 4416 nt2.19□□□□□ -2.06
RPP1AP05318 RSM22YKL155C 1887 nt2.19□□□□□ -2.06
RPP1AP05318 IRE1YHR079C 3348 nt2.19□□□□□ -2.06
RPP1AP05318 RGA1YOR127W 3024 nt2.18□□□□□ -2.06
RPP1AP05318 SFB2YNL049C 2631 nt2.18□□□□□ -2.06
RPP1AP05318 TIM9YEL020W-A 264 nt2.18□□□□□ -2.06
RPP1AP05318 RPS26AYGL189C 360 nt2.18□□□□□ -2.06
RPP1AP05318 UFD4YKL010C 4452 nt2.17□□□□□ -2.06
RPP1AP05318 KRE33YNL132W 3171 nt2.17□□□□□ -2.06
RPP1AP05318 YKL100W-AYKL100W-A 90 nt2.17□□□□□ -2.06
RPP1AP05318 YOR055WYOR055W 435 nt2.17□□□□□ -2.06
RPP1AP05318 TRM3YDL112W 4311 nt2.17□□□□□ -2.06
RPP1AP05318 ALY2YJL084C 3141 nt2.16□□□□□ -2.06
RPP1AP05318 FYV10YIL097W 1551 nt2.16□□□□□ -2.06
RPP1AP05318 YML002WYML002W 2214 nt2.16□□□□□ -2.06
RPP1AP05318 PET309YLR067C 2898 nt2.16□□□□□ -2.06
RPP1AP05318 YPL216WYPL216W 3309 nt2.15□□□□□ -2.07
RPP1AP05318 YAR009CYAR009C 3591 nt2.15□□□□□ -2.07
RPP1AP05318 NAB6YML117W 3405 nt2.14□□□□□ -2.07
RPP1AP05318 YBL005W-BYBL005W-B 5268 nt2.14□□□□□ -2.07
RPP1AP05318 YOL098CYOL098C 3114 nt2.14□□□□□ -2.07
RPP1AP05318 VPS13YLL040C 9435 nt2.14□□□□□ -2.07
RPP1AP05318 ASE1YOR058C 2658 nt2.14□□□□□ -2.07
RPP1AP05318 RAD50YNL250W 3939 nt2.13□□□□□ -2.07
RPP1AP05318 MSH6YDR097C 3729 nt2.13□□□□□ -2.07
RPP1AP05318 MON2YNL297C 4911 nt2.13□□□□□ -2.07
RPP1AP05318 RSE1YML049C 4086 nt2.12□□□□□ -2.07
RPP1AP05318 YGR146C-AYGR146C-A 162 nt2.12□□□□□ -2.07
RPP1AP05318 YOL164W-AYOL164W-A 183 nt2.12□□□□□ -2.07
RPP1AP05318 PAN2YGL094C 3348 nt2.12□□□□□ -2.07
RPP1AP05318 PDR1YGL013C 3207 nt2.12□□□□□ -2.07
RPP1AP05318 IRC20YLR247C 4671 nt2.11□□□□□ -2.07
RPP1AP05318 YDL073WYDL073W 2955 nt2.11□□□□□ -2.07
RPP1AP05318 YOR296WYOR296W 3870 nt2.11□□□□□ -2.07
RPP1AP05318 GLG1YKR058W 1851 nt2.1□□□□□ -2.07
RPP1AP05318 MYO1YHR023W 5787 nt2.1□□□□□ -2.07
RPP1AP05318 RTT101YJL047C 2529 nt2.1□□□□□ -2.07
RPP1AP05318 ORC3YLL004W 1851 nt2.09□□□□□ -2.07
RPP1AP05318 UTP21YLR409C 2820 nt2.09□□□□□ -2.07
RPP1AP05318 TRM732YMR259C 4263 nt2.09□□□□□ -2.08
RPP1AP05318 YPR097WYPR097W 3222 nt2.08□□□□□ -2.08
RPP1AP05318 RPL26BYGR034W 384 nt2.07□□□□□ -2.08
RPP1AP05318 AZF1YOR113W 2745 nt2.06□□□□□ -2.08
RPP1AP05318 SSD1YDR293C 3753 nt2.06□□□□□ -2.08
RPP1AP05318 YGR240C-AYGR240C-A 201 nt2.06□□□□□ -2.08
RPP1AP05318 snR190snR190 190 nt2.06□□□□□ -2.08
RPP1AP05318 TOR2YKL203C 7425 nt2.06□□□□□ -2.08
RPP1AP05318 SMC4YLR086W 4257 nt2.06□□□□□ -2.08
RPP1AP05318 NOP9YJL010C 2001 nt2.05□□□□□ -2.08
RPP1AP05318 PIK1YNL267W 3201 nt2.05□□□□□ -2.08
RPP1AP05318 SPP41YDR464W 4308 nt2.05□□□□□ -2.08
RPP1AP05318 YLR286W-AYLR286W-A 135 nt2.05□□□□□ -2.08
RPP1AP05318 GYP5YPL249C 2685 nt2.05□□□□□ -2.08
RPP1AP05318 KAP122YGL016W 3246 nt2.05□□□□□ -2.08
RPP1AP05318 MMS4YBR098W 2076 nt2.05□□□□□ -2.08
RPP1AP05318 PDR11YIL013C 4236 nt2.04□□□□□ -2.08
RPP1AP05318 GCN2YDR283C 4980 nt2.04□□□□□ -2.08
RPP1AP05318 EMC5YIL027C 426 nt2.04□□□□□ -2.08
RPP1AP05318 TUS1YLR425W 3924 nt2.04□□□□□ -2.08
RPP1AP05318 SCD5YOR329C 2619 nt2.04□□□□□ -2.08
RPP1AP05318 WAR1YML076C 2835 nt2.03□□□□□ -2.08
RPP1AP05318 PMD1YER132C 5262 nt2.02□□□□□ -2.09
RPP1AP05318 snR53snR53 91 nt2.02□□□□□ -2.09
RPP1AP05318 YBR196C-AYBR196C-A 150 nt2□□□□□ -2.09
RPP1AP05318 GEA2YEL022W 4380 nt2□□□□□ -2.09
RPP1AP05318 STO1YMR125W 2586 nt2□□□□□ -2.09
RPP1AP05318 NNF2YGR089W 2811 nt1.99□□□□□ -2.09
RPP1AP05318 KCS1YDR017C 3153 nt1.99□□□□□ -2.09
RPP1AP05318 YDR371C-AYDR371C-A 105 nt1.99□□□□□ -2.09
RPP1AP05318 snR47snR47 99 nt1.99□□□□□ -2.09
RPP1AP05318 SMC1YFL008W 3678 nt1.99□□□□□ -2.09
RPP1AP05318 FKS3YMR306W 5358 nt1.99□□□□□ -2.09
RPP1AP05318 UBP3YER151C 2739 nt1.98□□□□□ -2.09
RPP1AP05318 PKH3YDR466W 2697 nt1.98□□□□□ -2.09
RPP1AP05318 PAU10YDR542W 363 nt1.98□□□□□ -2.09
RPP1AP05318 PAU4YLR461W 363 nt1.98□□□□□ -2.09
RPP1AP05318 PEP1YBL017C 4740 nt1.98□□□□□ -2.09
RPP1AP05318 RAD9YDR217C 3930 nt1.97□□□□□ -2.09
RPP1AP05318 KIP1YBL063W 3336 nt1.97□□□□□ -2.09
RPP1AP05318 tF(GAA)DtF(GAA)D 73 nt1.96□□□□□ -2.1
RPP1AP05318 tF(GAA)NtF(GAA)N 73 nt1.96□□□□□ -2.1
RPP1AP05318 SEC10YLR166C 2616 nt1.95□□□□□ -2.1
RPP1AP05318 VPS15YBR097W 4365 nt1.95□□□□□ -2.1
RPP1AP05318 TFC3YAL001C 3483 nt1.95□□□□□ -2.1
RPP1AP05318 SAC3YDR159W 3906 nt1.95□□□□□ -2.1
RPP1AP05318 UBP2YOR124C 3819 nt1.94□□□□□ -2.1
RPP1AP05318 DBP10YDL031W 2988 nt1.94□□□□□ -2.1
RPP1AP05318 SSK2YNR031C 4740 nt1.94□□□□□ -2.1
RPP1AP05318 MSB1YOR188W 3414 nt1.94□□□□□ -2.1
RPP1AP05318 MYO2YOR326W 4725 nt1.93□□□□□ -2.1
RPP1AP05318 YBL100W-CYBL100W-C 120 nt1.93□□□□□ -2.1
RPP1AP05318 MGA2YIR033W 3342 nt1.93□□□□□ -2.1
RPP1AP05318 TDA9YML081W 3756 nt1.92□□□□□ -2.1
RPP1AP05318 HER1YOR227W 3741 nt1.92□□□□□ -2.1
RPP1AP05318 DGR1YNL130C-A 147 nt1.92□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 51.7 ms