Protein–RNA interactions for Protein: P04000

OPN1LW, Long-wave-sensitive opsin 1, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1LWP04000 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1LWP04000 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.16■□□□□ 0.5
OPN1LWP04000 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.16■□□□□ 0.5
OPN1LWP04000 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1LWP04000 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1LWP04000 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1LWP04000 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.16■□□□□ 0.5
OPN1LWP04000 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.16■□□□□ 0.5
OPN1LWP04000 AC092368.3-202ENST00000574180 1591 ntBASIC18.16■□□□□ 0.5
OPN1LWP04000 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.16■□□□□ 0.5
OPN1LWP04000 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1LWP04000 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPN1LWP04000 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
OPN1LWP04000 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.15■□□□□ 0.5
OPN1LWP04000 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
OPN1LWP04000 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.15■□□□□ 0.5
OPN1LWP04000 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.15■□□□□ 0.5
OPN1LWP04000 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 MIR4651-201ENST00000582622 73 ntBASIC18.15■□□□□ 0.5
OPN1LWP04000 AC006557.6-201ENST00000623071 864 ntBASIC18.15■□□□□ 0.5
OPN1LWP04000 AC112907.3-201ENST00000577781 2400 ntBASIC18.15■□□□□ 0.5
OPN1LWP04000 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
OPN1LWP04000 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
OPN1LWP04000 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
OPN1LWP04000 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
OPN1LWP04000 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
OPN1LWP04000 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
OPN1LWP04000 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OPN1LWP04000 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
OPN1LWP04000 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.14■□□□□ 0.5
OPN1LWP04000 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
OPN1LWP04000 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
OPN1LWP04000 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
OPN1LWP04000 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.14■□□□□ 0.49
OPN1LWP04000 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
OPN1LWP04000 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
OPN1LWP04000 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
OPN1LWP04000 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.14■□□□□ 0.49
OPN1LWP04000 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.14■□□□□ 0.49
OPN1LWP04000 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
OPN1LWP04000 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
OPN1LWP04000 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
OPN1LWP04000 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
OPN1LWP04000 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
OPN1LWP04000 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1LWP04000 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1LWP04000 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1LWP04000 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1LWP04000 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1LWP04000 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1LWP04000 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1LWP04000 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1LWP04000 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1LWP04000 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1LWP04000 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.13■□□□□ 0.49
OPN1LWP04000 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
OPN1LWP04000 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.13■□□□□ 0.49
OPN1LWP04000 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1LWP04000 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1LWP04000 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1LWP04000 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1LWP04000 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
OPN1LWP04000 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1LWP04000 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1LWP04000 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.12■□□□□ 0.49
OPN1LWP04000 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1LWP04000 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1LWP04000 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1LWP04000 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1LWP04000 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.12■□□□□ 0.49
OPN1LWP04000 PNMA6B-201ENST00000538162 1200 ntBASIC18.12■□□□□ 0.49
OPN1LWP04000 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.12■□□□□ 0.49
OPN1LWP04000 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
OPN1LWP04000 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1LWP04000 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1LWP04000 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1LWP04000 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1LWP04000 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.12■□□□□ 0.49
OPN1LWP04000 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1LWP04000 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
OPN1LWP04000 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1LWP04000 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1LWP04000 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1LWP04000 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1LWP04000 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms