Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ALDH1A1P00352 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ALDH1A1P00352 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23■■□□□ 1.27
ALDH1A1P00352 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
ALDH1A1P00352 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
ALDH1A1P00352 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC23■■□□□ 1.27
ALDH1A1P00352 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23■■□□□ 1.27
ALDH1A1P00352 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC23■■□□□ 1.27
ALDH1A1P00352 COX11P1-201ENST00000489116 835 ntBASIC23■■□□□ 1.27
ALDH1A1P00352 CYGB-204ENST00000589342 815 ntTSL 3 BASIC23■■□□□ 1.27
ALDH1A1P00352 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC23■■□□□ 1.27
ALDH1A1P00352 AC131212.4-201ENST00000623606 975 ntBASIC23■■□□□ 1.27
ALDH1A1P00352 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23■■□□□ 1.27
ALDH1A1P00352 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23■■□□□ 1.27
ALDH1A1P00352 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ALDH1A1P00352 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ALDH1A1P00352 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ALDH1A1P00352 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.99■■□□□ 1.27
ALDH1A1P00352 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ALDH1A1P00352 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ALDH1A1P00352 CD320-202ENST00000537716 1119 ntTSL 2 BASIC22.99■■□□□ 1.27
ALDH1A1P00352 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC22.99■■□□□ 1.27
ALDH1A1P00352 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ALDH1A1P00352 MIR2861-201ENST00000636310 90 ntBASIC22.99■■□□□ 1.27
ALDH1A1P00352 VPS72-207ENST00000640458 689 ntTSL 5 BASIC22.99■■□□□ 1.27
ALDH1A1P00352 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ALDH1A1P00352 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ALDH1A1P00352 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ALDH1A1P00352 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.99■■□□□ 1.27
ALDH1A1P00352 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.99■■□□□ 1.27
ALDH1A1P00352 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ALDH1A1P00352 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ALDH1A1P00352 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
ALDH1A1P00352 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.98■■□□□ 1.27
ALDH1A1P00352 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ALDH1A1P00352 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
ALDH1A1P00352 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ALDH1A1P00352 CCR12P-201ENST00000446203 998 ntBASIC22.98■■□□□ 1.27
ALDH1A1P00352 FAM86EP-206ENST00000510506 987 ntBASIC22.98■■□□□ 1.27
ALDH1A1P00352 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC22.98■■□□□ 1.27
ALDH1A1P00352 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ALDH1A1P00352 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.98■■□□□ 1.27
ALDH1A1P00352 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
ALDH1A1P00352 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ALDH1A1P00352 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ALDH1A1P00352 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ALDH1A1P00352 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
ALDH1A1P00352 IER3-202ENST00000376377 1350 ntBASIC22.98■■□□□ 1.27
ALDH1A1P00352 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ALDH1A1P00352 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
ALDH1A1P00352 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ALDH1A1P00352 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.97■■□□□ 1.27
ALDH1A1P00352 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
ALDH1A1P00352 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ALDH1A1P00352 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ALDH1A1P00352 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.97■■□□□ 1.27
ALDH1A1P00352 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ALDH1A1P00352 AC004980.1-204ENST00000429707 299 ntBASIC22.97■■□□□ 1.27
ALDH1A1P00352 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.97■■□□□ 1.27
ALDH1A1P00352 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.97■■□□□ 1.27
ALDH1A1P00352 SLC25A1P4-201ENST00000567977 778 ntBASIC22.97■■□□□ 1.27
ALDH1A1P00352 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ALDH1A1P00352 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.97■■□□□ 1.27
ALDH1A1P00352 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC22.97■■□□□ 1.27
ALDH1A1P00352 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
ALDH1A1P00352 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.97■■□□□ 1.27
ALDH1A1P00352 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.97■■□□□ 1.27
ALDH1A1P00352 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ALDH1A1P00352 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
ALDH1A1P00352 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.97■■□□□ 1.27
ALDH1A1P00352 AP006587.1-201ENST00000534129 1502 ntBASIC22.97■■□□□ 1.27
ALDH1A1P00352 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.97■■□□□ 1.27
ALDH1A1P00352 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ALDH1A1P00352 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.96■■□□□ 1.27
ALDH1A1P00352 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ALDH1A1P00352 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ALDH1A1P00352 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
ALDH1A1P00352 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.96■■□□□ 1.27
ALDH1A1P00352 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.96■■□□□ 1.27
ALDH1A1P00352 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ALDH1A1P00352 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC22.96■■□□□ 1.27
ALDH1A1P00352 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.96■■□□□ 1.27
ALDH1A1P00352 AP000692.2-201ENST00000608391 879 ntBASIC22.96■■□□□ 1.27
ALDH1A1P00352 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.96■■□□□ 1.27
ALDH1A1P00352 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ALDH1A1P00352 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
ALDH1A1P00352 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
ALDH1A1P00352 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ALDH1A1P00352 KRT8P20-201ENST00000423953 1409 ntBASIC22.96■■□□□ 1.27
ALDH1A1P00352 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
ALDH1A1P00352 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
ALDH1A1P00352 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ALDH1A1P00352 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ALDH1A1P00352 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
ALDH1A1P00352 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.96■■□□□ 1.27
ALDH1A1P00352 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ALDH1A1P00352 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ALDH1A1P00352 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC22.95■■□□□ 1.26
ALDH1A1P00352 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.95■■□□□ 1.26
ALDH1A1P00352 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms