Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.54■■□□□ 1.2
GGPS1O95749 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
GGPS1O95749 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
GGPS1O95749 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
GGPS1O95749 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
GGPS1O95749 HLA-G-202ENST00000376815 851 ntBASIC22.54■■□□□ 1.2
GGPS1O95749 HLA-G-203ENST00000376818 1127 ntBASIC22.54■■□□□ 1.2
GGPS1O95749 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.54■■□□□ 1.2
GGPS1O95749 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
GGPS1O95749 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.54■■□□□ 1.2
GGPS1O95749 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.54■■□□□ 1.2
GGPS1O95749 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
GGPS1O95749 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
GGPS1O95749 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.53■■□□□ 1.2
GGPS1O95749 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
GGPS1O95749 TSPY7P-201ENST00000431358 1114 ntBASIC22.53■■□□□ 1.2
GGPS1O95749 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
GGPS1O95749 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.53■■□□□ 1.2
GGPS1O95749 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.53■■□□□ 1.2
GGPS1O95749 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.53■■□□□ 1.2
GGPS1O95749 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.53■■□□□ 1.2
GGPS1O95749 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
GGPS1O95749 AL049637.2-201ENST00000641778 930 ntBASIC22.53■■□□□ 1.2
GGPS1O95749 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.53■■□□□ 1.2
GGPS1O95749 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
GGPS1O95749 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.53■■□□□ 1.2
GGPS1O95749 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.52■■□□□ 1.2
GGPS1O95749 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
GGPS1O95749 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.52■■□□□ 1.2
GGPS1O95749 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
GGPS1O95749 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
GGPS1O95749 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
GGPS1O95749 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
GGPS1O95749 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
GGPS1O95749 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
GGPS1O95749 AL135905.2-201ENST00000584934 1404 ntBASIC22.52■■□□□ 1.2
GGPS1O95749 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
GGPS1O95749 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
GGPS1O95749 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
GGPS1O95749 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
GGPS1O95749 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
GGPS1O95749 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.52■■□□□ 1.2
GGPS1O95749 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.52■■□□□ 1.2
GGPS1O95749 RARRES2P10-201ENST00000564312 460 ntBASIC22.52■■□□□ 1.2
GGPS1O95749 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.52■■□□□ 1.2
GGPS1O95749 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
GGPS1O95749 AL031963.3-201ENST00000606441 850 ntBASIC22.52■■□□□ 1.2
GGPS1O95749 AL121906.2-201ENST00000621597 723 ntBASIC22.52■■□□□ 1.2
GGPS1O95749 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
GGPS1O95749 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.52■■□□□ 1.2
GGPS1O95749 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.52■■□□□ 1.2
GGPS1O95749 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
GGPS1O95749 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.52■■□□□ 1.19
GGPS1O95749 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.19
GGPS1O95749 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
GGPS1O95749 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
GGPS1O95749 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.51■■□□□ 1.19
GGPS1O95749 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
GGPS1O95749 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
GGPS1O95749 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
GGPS1O95749 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.51■■□□□ 1.19
GGPS1O95749 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.51■■□□□ 1.19
GGPS1O95749 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
GGPS1O95749 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
GGPS1O95749 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
GGPS1O95749 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
GGPS1O95749 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.51■■□□□ 1.19
GGPS1O95749 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
GGPS1O95749 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.51■■□□□ 1.19
GGPS1O95749 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
GGPS1O95749 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
GGPS1O95749 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
GGPS1O95749 KRT8P20-201ENST00000423953 1409 ntBASIC22.5■■□□□ 1.19
GGPS1O95749 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
GGPS1O95749 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
GGPS1O95749 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
GGPS1O95749 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
GGPS1O95749 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.5■■□□□ 1.19
GGPS1O95749 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
GGPS1O95749 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
GGPS1O95749 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
GGPS1O95749 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.5■■□□□ 1.19
GGPS1O95749 AP001412.1-201ENST00000608405 714 ntBASIC22.5■■□□□ 1.19
GGPS1O95749 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.5■■□□□ 1.19
GGPS1O95749 AC113410.3-201ENST00000623366 203 ntBASIC22.5■■□□□ 1.19
GGPS1O95749 AC005229.4-201ENST00000610085 2198 ntBASIC22.5■■□□□ 1.19
GGPS1O95749 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.5■■□□□ 1.19
GGPS1O95749 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
GGPS1O95749 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
GGPS1O95749 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
GGPS1O95749 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
GGPS1O95749 NBPF21P-201ENST00000425093 1451 ntBASIC22.49■■□□□ 1.19
GGPS1O95749 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
GGPS1O95749 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.49■■□□□ 1.19
GGPS1O95749 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
GGPS1O95749 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
GGPS1O95749 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
GGPS1O95749 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.49■■□□□ 1.19
GGPS1O95749 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
GGPS1O95749 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms