Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.63■□□□□ 0.41
ALX3O95076 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.63■□□□□ 0.41
ALX3O95076 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.63■□□□□ 0.41
ALX3O95076 KRT18P20-201ENST00000548986 1279 ntBASIC17.63■□□□□ 0.41
ALX3O95076 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ALX3O95076 AL512408.1-201ENST00000569378 2000 ntBASIC17.63■□□□□ 0.41
ALX3O95076 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.63■□□□□ 0.41
ALX3O95076 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.63■□□□□ 0.41
ALX3O95076 AC116050.2-201ENST00000612102 1779 ntBASIC17.63■□□□□ 0.41
ALX3O95076 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.63■□□□□ 0.41
ALX3O95076 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 AL049812.1-201ENST00000432563 2267 ntBASIC17.63■□□□□ 0.41
ALX3O95076 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALX3O95076 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ALX3O95076 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALX3O95076 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.62■□□□□ 0.41
ALX3O95076 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALX3O95076 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ALX3O95076 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.62■□□□□ 0.41
ALX3O95076 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.62■□□□□ 0.41
ALX3O95076 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ALX3O95076 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALX3O95076 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ALX3O95076 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALX3O95076 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ALX3O95076 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.62■□□□□ 0.41
ALX3O95076 AC092720.2-201ENST00000602388 1665 ntBASIC17.62■□□□□ 0.41
ALX3O95076 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.62■□□□□ 0.41
ALX3O95076 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ALX3O95076 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALX3O95076 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ALX3O95076 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.62■□□□□ 0.41
ALX3O95076 DUX4L2-201ENST00000561772 1275 ntBASIC17.62■□□□□ 0.41
ALX3O95076 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.62■□□□□ 0.41
ALX3O95076 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.62■□□□□ 0.41
ALX3O95076 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
ALX3O95076 DUX4L6-201ENST00000626483 1275 ntBASIC17.62■□□□□ 0.41
ALX3O95076 DUX4L1-201ENST00000627662 1275 ntBASIC17.62■□□□□ 0.41
ALX3O95076 DUX4L8-201ENST00000629013 1275 ntBASIC17.62■□□□□ 0.41
ALX3O95076 DUX4L3-201ENST00000630187 1275 ntBASIC17.62■□□□□ 0.41
ALX3O95076 DUX4L7-201ENST00000630678 1275 ntBASIC17.62■□□□□ 0.41
ALX3O95076 DUX4L5-201ENST00000630834 1275 ntBASIC17.62■□□□□ 0.41
ALX3O95076 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
ALX3O95076 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALX3O95076 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ALX3O95076 LINC02228-203ENST00000641970 1355 ntBASIC17.62■□□□□ 0.41
ALX3O95076 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.62■□□□□ 0.41
ALX3O95076 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.62■□□□□ 0.41
ALX3O95076 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ALX3O95076 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALX3O95076 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALX3O95076 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ALX3O95076 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.62■□□□□ 0.41
ALX3O95076 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALX3O95076 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ALX3O95076 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALX3O95076 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ALX3O95076 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ALX3O95076 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALX3O95076 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.61■□□□□ 0.41
ALX3O95076 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.61■□□□□ 0.41
ALX3O95076 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.61■□□□□ 0.41
ALX3O95076 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.61■□□□□ 0.41
ALX3O95076 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.61■□□□□ 0.41
ALX3O95076 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALX3O95076 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALX3O95076 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALX3O95076 MIR6084-201ENST00000622012 110 ntBASIC17.61■□□□□ 0.41
ALX3O95076 MIR2861-201ENST00000636310 90 ntBASIC17.61■□□□□ 0.41
ALX3O95076 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALX3O95076 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALX3O95076 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALX3O95076 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.61■□□□□ 0.41
ALX3O95076 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALX3O95076 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALX3O95076 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALX3O95076 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALX3O95076 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALX3O95076 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ALX3O95076 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALX3O95076 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALX3O95076 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.6■□□□□ 0.41
ALX3O95076 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.6■□□□□ 0.41
ALX3O95076 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.6■□□□□ 0.41
ALX3O95076 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ALX3O95076 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.6■□□□□ 0.41
ALX3O95076 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ALX3O95076 AC123595.1-201ENST00000440769 1046 ntBASIC17.6■□□□□ 0.41
ALX3O95076 AC090192.1-201ENST00000517740 490 ntBASIC17.6■□□□□ 0.41
ALX3O95076 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.6■□□□□ 0.41
ALX3O95076 CCDC92B-201ENST00000575506 885 ntBASIC17.6■□□□□ 0.41
ALX3O95076 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.6■□□□□ 0.41
ALX3O95076 AC243732.1-201ENST00000612648 864 ntBASIC17.6■□□□□ 0.41
ALX3O95076 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms