Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1BO75841 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1BO75841 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
UPK1BO75841 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1BO75841 AL354751.1-201ENST00000412768 1863 ntBASIC17.48■□□□□ 0.39
UPK1BO75841 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPK1BO75841 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.47■□□□□ 0.39
UPK1BO75841 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1BO75841 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1BO75841 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.47■□□□□ 0.39
UPK1BO75841 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1BO75841 RPS2P35-201ENST00000443417 897 ntBASIC17.47■□□□□ 0.39
UPK1BO75841 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1BO75841 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1BO75841 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1BO75841 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1BO75841 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1BO75841 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1BO75841 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.47■□□□□ 0.39
UPK1BO75841 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1BO75841 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1BO75841 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1BO75841 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPK1BO75841 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
UPK1BO75841 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1BO75841 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1BO75841 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1BO75841 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1BO75841 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1BO75841 BICD1-207ENST00000551848 1962 ntBASIC17.46■□□□□ 0.39
UPK1BO75841 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.46■□□□□ 0.39
UPK1BO75841 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1BO75841 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1BO75841 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1BO75841 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1BO75841 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1BO75841 AC139795.1-202ENST00000500444 432 ntBASIC17.46■□□□□ 0.39
UPK1BO75841 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.46■□□□□ 0.39
UPK1BO75841 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.46■□□□□ 0.39
UPK1BO75841 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1BO75841 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
UPK1BO75841 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1BO75841 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPK1BO75841 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.46■□□□□ 0.39
UPK1BO75841 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.46■□□□□ 0.39
UPK1BO75841 AC139713.2-201ENST00000641328 2723 ntBASIC17.46■□□□□ 0.39
UPK1BO75841 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.46■□□□□ 0.38
UPK1BO75841 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
UPK1BO75841 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
UPK1BO75841 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1BO75841 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1BO75841 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.45■□□□□ 0.38
UPK1BO75841 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1BO75841 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1BO75841 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1BO75841 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
UPK1BO75841 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
UPK1BO75841 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
UPK1BO75841 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
UPK1BO75841 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.45■□□□□ 0.38
UPK1BO75841 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1BO75841 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.45■□□□□ 0.38
UPK1BO75841 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
UPK1BO75841 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.45■□□□□ 0.38
UPK1BO75841 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1BO75841 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
UPK1BO75841 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.45■□□□□ 0.38
UPK1BO75841 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
UPK1BO75841 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1BO75841 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1BO75841 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1BO75841 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.45■□□□□ 0.38
UPK1BO75841 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1BO75841 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.45■□□□□ 0.38
UPK1BO75841 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
UPK1BO75841 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1BO75841 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1BO75841 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1BO75841 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.45■□□□□ 0.38
UPK1BO75841 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPK1BO75841 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
UPK1BO75841 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
UPK1BO75841 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.44■□□□□ 0.38
UPK1BO75841 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
UPK1BO75841 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1BO75841 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1BO75841 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1BO75841 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
UPK1BO75841 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.44■□□□□ 0.38
UPK1BO75841 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
UPK1BO75841 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.44■□□□□ 0.38
UPK1BO75841 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.44■□□□□ 0.38
UPK1BO75841 AC129492.7-201ENST00000622992 756 ntBASIC17.44■□□□□ 0.38
UPK1BO75841 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1BO75841 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
UPK1BO75841 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.44■□□□□ 0.38
UPK1BO75841 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1BO75841 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1BO75841 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPK1BO75841 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms