Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF254O75437 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF254O75437 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF254O75437 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ZNF254O75437 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ZNF254O75437 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF254O75437 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
ZNF254O75437 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF254O75437 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF254O75437 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF254O75437 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF254O75437 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ZNF254O75437 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF254O75437 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF254O75437 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF254O75437 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF254O75437 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF254O75437 UBE2DNL-204ENST00000602536 740 ntBASIC17.71■□□□□ 0.43
ZNF254O75437 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF254O75437 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ZNF254O75437 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF254O75437 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF254O75437 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF254O75437 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF254O75437 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF254O75437 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ZNF254O75437 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 AC116562.4-201ENST00000641316 2276 ntBASIC17.7■□□□□ 0.42
ZNF254O75437 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF254O75437 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF254O75437 TMEM179-206ENST00000616017 1645 ntBASIC17.7■□□□□ 0.42
ZNF254O75437 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.7■□□□□ 0.42
ZNF254O75437 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.7■□□□□ 0.42
ZNF254O75437 AL591742.1-201ENST00000604433 565 ntBASIC17.7■□□□□ 0.42
ZNF254O75437 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 AC087633.2-202ENST00000565166 1439 ntBASIC17.7■□□□□ 0.42
ZNF254O75437 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF254O75437 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ZNF254O75437 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF254O75437 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF254O75437 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF254O75437 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ZNF254O75437 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ZNF254O75437 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.69■□□□□ 0.42
ZNF254O75437 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF254O75437 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF254O75437 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF254O75437 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.69■□□□□ 0.42
ZNF254O75437 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF254O75437 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF254O75437 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF254O75437 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF254O75437 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.69■□□□□ 0.42
ZNF254O75437 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.69■□□□□ 0.42
ZNF254O75437 AL162412.1-201ENST00000567129 965 ntBASIC17.69■□□□□ 0.42
ZNF254O75437 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.69■□□□□ 0.42
ZNF254O75437 AL356652.1-201ENST00000615962 565 ntBASIC17.69■□□□□ 0.42
ZNF254O75437 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF254O75437 BX119927.1-201ENST00000636596 1552 ntBASIC17.69■□□□□ 0.42
ZNF254O75437 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.69■□□□□ 0.42
ZNF254O75437 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF254O75437 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF254O75437 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.69■□□□□ 0.42
ZNF254O75437 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ZNF254O75437 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF254O75437 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ZNF254O75437 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF254O75437 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF254O75437 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF254O75437 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF254O75437 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF254O75437 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ZNF254O75437 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.68■□□□□ 0.42
ZNF254O75437 TERF1P5-201ENST00000477545 1207 ntBASIC17.68■□□□□ 0.42
ZNF254O75437 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.68■□□□□ 0.42
ZNF254O75437 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.68■□□□□ 0.42
ZNF254O75437 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF254O75437 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ZNF254O75437 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ZNF254O75437 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.68■□□□□ 0.42
ZNF254O75437 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.68■□□□□ 0.42
ZNF254O75437 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF254O75437 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.68■□□□□ 0.42
ZNF254O75437 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.68■□□□□ 0.42
ZNF254O75437 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms