Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
BRD4O60885 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC27.8■■■□□ 2.04
BRD4O60885 TSPY7P-201ENST00000431358 1114 ntBASIC27.8■■■□□ 2.04
BRD4O60885 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC27.8■■■□□ 2.04
BRD4O60885 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC27.8■■■□□ 2.04
BRD4O60885 MAX-217ENST00000557277 728 ntTSL 3 BASIC27.8■■■□□ 2.04
BRD4O60885 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
BRD4O60885 STAC-204ENST00000457375 1366 ntTSL 2 BASIC27.8■■■□□ 2.04
BRD4O60885 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
BRD4O60885 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC27.8■■■□□ 2.04
BRD4O60885 AC027702.1-201ENST00000563810 1770 ntBASIC27.8■■■□□ 2.04
BRD4O60885 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC27.79■■■□□ 2.04
BRD4O60885 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC27.79■■■□□ 2.04
BRD4O60885 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
BRD4O60885 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
BRD4O60885 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC27.79■■■□□ 2.04
BRD4O60885 LINC01521-201ENST00000504184 1943 ntBASIC27.79■■■□□ 2.04
BRD4O60885 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
BRD4O60885 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
BRD4O60885 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
BRD4O60885 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC27.79■■■□□ 2.04
BRD4O60885 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC27.79■■■□□ 2.04
BRD4O60885 AC023632.3-201ENST00000521633 145 ntBASIC27.79■■■□□ 2.04
BRD4O60885 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC27.79■■■□□ 2.04
BRD4O60885 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC27.79■■■□□ 2.04
BRD4O60885 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC27.79■■■□□ 2.04
BRD4O60885 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC27.79■■■□□ 2.04
BRD4O60885 SNX21-213ENST00000614929 587 ntTSL 5 BASIC27.79■■■□□ 2.04
BRD4O60885 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC27.79■■■□□ 2.04
BRD4O60885 AC073314.1-201ENST00000568729 2216 ntBASIC27.79■■■□□ 2.04
BRD4O60885 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
BRD4O60885 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
BRD4O60885 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
BRD4O60885 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
BRD4O60885 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
BRD4O60885 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
BRD4O60885 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
BRD4O60885 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
BRD4O60885 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC27.78■■■□□ 2.04
BRD4O60885 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC27.78■■■□□ 2.04
BRD4O60885 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC27.78■■■□□ 2.04
BRD4O60885 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
BRD4O60885 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
BRD4O60885 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
BRD4O60885 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC27.78■■■□□ 2.04
BRD4O60885 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC27.78■■■□□ 2.04
BRD4O60885 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
BRD4O60885 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
BRD4O60885 GABARAPL3-202ENST00000624044 1851 ntBASIC27.78■■■□□ 2.04
BRD4O60885 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC27.77■■■□□ 2.04
BRD4O60885 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
BRD4O60885 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC27.77■■■□□ 2.04
BRD4O60885 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
BRD4O60885 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
BRD4O60885 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
BRD4O60885 AL121829.2-201ENST00000620908 328 ntBASIC27.77■■■□□ 2.04
BRD4O60885 CABP2-204ENST00000636477 941 ntTSL 5 BASIC27.77■■■□□ 2.04
BRD4O60885 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
BRD4O60885 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
BRD4O60885 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
BRD4O60885 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC27.77■■■□□ 2.04
BRD4O60885 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC27.77■■■□□ 2.04
BRD4O60885 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC27.76■■■□□ 2.04
BRD4O60885 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.04
BRD4O60885 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
BRD4O60885 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC27.76■■■□□ 2.03
BRD4O60885 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC27.76■■■□□ 2.03
BRD4O60885 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC27.76■■■□□ 2.03
BRD4O60885 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC27.76■■■□□ 2.03
BRD4O60885 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC27.76■■■□□ 2.03
BRD4O60885 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC27.76■■■□□ 2.03
BRD4O60885 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
BRD4O60885 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
BRD4O60885 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
BRD4O60885 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
BRD4O60885 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
BRD4O60885 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
BRD4O60885 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
BRD4O60885 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
BRD4O60885 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC27.76■■■□□ 2.03
BRD4O60885 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC27.75■■■□□ 2.03
BRD4O60885 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC27.75■■■□□ 2.03
BRD4O60885 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC27.75■■■□□ 2.03
BRD4O60885 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC27.75■■■□□ 2.03
BRD4O60885 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
BRD4O60885 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
BRD4O60885 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
BRD4O60885 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC27.74■■■□□ 2.03
BRD4O60885 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
BRD4O60885 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC27.74■■■□□ 2.03
BRD4O60885 HES2-206ENST00000489730 730 ntTSL 2 BASIC27.74■■■□□ 2.03
BRD4O60885 TK2-204ENST00000525974 1178 ntTSL 2 BASIC27.74■■■□□ 2.03
BRD4O60885 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC27.74■■■□□ 2.03
BRD4O60885 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC27.74■■■□□ 2.03
BRD4O60885 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
BRD4O60885 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
BRD4O60885 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
BRD4O60885 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
BRD4O60885 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
BRD4O60885 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms