Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM13O60858 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM13O60858 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM13O60858 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM13O60858 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM13O60858 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM13O60858 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM13O60858 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM13O60858 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM13O60858 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM13O60858 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
TRIM13O60858 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRIM13O60858 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM13O60858 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TRIM13O60858 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM13O60858 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRIM13O60858 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM13O60858 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM13O60858 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM13O60858 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM13O60858 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM13O60858 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM13O60858 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRIM13O60858 AP000974.1-201ENST00000623909 2387 ntBASIC19.69■□□□□ 0.74
TRIM13O60858 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM13O60858 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM13O60858 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM13O60858 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM13O60858 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM13O60858 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM13O60858 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM13O60858 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM13O60858 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM13O60858 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM13O60858 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM13O60858 YBX1P1-201ENST00000445822 960 ntBASIC19.68■□□□□ 0.74
TRIM13O60858 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM13O60858 KRT18P14-201ENST00000534205 1250 ntBASIC19.68■□□□□ 0.74
TRIM13O60858 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM13O60858 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
TRIM13O60858 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TRIM13O60858 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM13O60858 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM13O60858 AC087633.2-202ENST00000565166 1439 ntBASIC19.68■□□□□ 0.74
TRIM13O60858 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM13O60858 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM13O60858 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRIM13O60858 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRIM13O60858 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRIM13O60858 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM13O60858 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRIM13O60858 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM13O60858 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.67■□□□□ 0.74
TRIM13O60858 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM13O60858 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM13O60858 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRIM13O60858 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM13O60858 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM13O60858 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM13O60858 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.66■□□□□ 0.74
TRIM13O60858 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM13O60858 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM13O60858 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
TRIM13O60858 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM13O60858 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TRIM13O60858 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM13O60858 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM13O60858 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM13O60858 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM13O60858 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM13O60858 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM13O60858 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM13O60858 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM13O60858 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM13O60858 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM13O60858 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM13O60858 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM13O60858 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRIM13O60858 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM13O60858 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRIM13O60858 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM13O60858 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM13O60858 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM13O60858 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM13O60858 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms