Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.73■□□□□ 0.75
SNX3O60493 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX3O60493 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX3O60493 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SNX3O60493 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX3O60493 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SNX3O60493 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX3O60493 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX3O60493 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX3O60493 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX3O60493 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX3O60493 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SNX3O60493 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX3O60493 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX3O60493 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX3O60493 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
SNX3O60493 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SNX3O60493 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX3O60493 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
SNX3O60493 AC009113.1-201ENST00000570267 2443 ntBASIC19.72■□□□□ 0.75
SNX3O60493 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.72■□□□□ 0.75
SNX3O60493 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.72■□□□□ 0.75
SNX3O60493 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SNX3O60493 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX3O60493 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX3O60493 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 AC011298.3-201ENST00000615796 283 ntBASIC19.72■□□□□ 0.75
SNX3O60493 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX3O60493 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX3O60493 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX3O60493 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.72■□□□□ 0.75
SNX3O60493 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.71■□□□□ 0.75
SNX3O60493 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX3O60493 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX3O60493 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SNX3O60493 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX3O60493 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX3O60493 KRT8P36-201ENST00000489121 1440 ntBASIC19.71■□□□□ 0.75
SNX3O60493 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.71■□□□□ 0.75
SNX3O60493 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.71■□□□□ 0.75
SNX3O60493 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX3O60493 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX3O60493 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SNX3O60493 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.71■□□□□ 0.75
SNX3O60493 AL356740.2-201ENST00000601559 647 ntBASIC19.71■□□□□ 0.75
SNX3O60493 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX3O60493 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX3O60493 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX3O60493 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SNX3O60493 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.71■□□□□ 0.75
SNX3O60493 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX3O60493 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX3O60493 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SNX3O60493 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX3O60493 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX3O60493 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX3O60493 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX3O60493 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX3O60493 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX3O60493 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX3O60493 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX3O60493 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SNX3O60493 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX3O60493 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.7■□□□□ 0.74
SNX3O60493 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SNX3O60493 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SNX3O60493 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.7■□□□□ 0.74
SNX3O60493 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.7■□□□□ 0.74
SNX3O60493 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX3O60493 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX3O60493 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SNX3O60493 AL390961.4-201ENST00000623958 2535 ntBASIC19.7■□□□□ 0.74
SNX3O60493 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX3O60493 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX3O60493 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX3O60493 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.7■□□□□ 0.74
SNX3O60493 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SNX3O60493 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SNX3O60493 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX3O60493 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX3O60493 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX3O60493 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
SNX3O60493 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX3O60493 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX3O60493 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SNX3O60493 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms