Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA12O60330 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA12O60330 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCDHGA12O60330 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA12O60330 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA12O60330 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA12O60330 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA12O60330 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDHGA12O60330 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGA12O60330 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA12O60330 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGA12O60330 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDHGA12O60330 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGA12O60330 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGA12O60330 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA12O60330 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA12O60330 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA12O60330 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA12O60330 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA12O60330 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA12O60330 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA12O60330 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA12O60330 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDHGA12O60330 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDHGA12O60330 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHGA12O60330 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PCDHGA12O60330 AC012306.2-201ENST00000609350 630 ntBASIC19.86■□□□□ 0.77
PCDHGA12O60330 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHGA12O60330 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA12O60330 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA12O60330 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA12O60330 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA12O60330 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA12O60330 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA12O60330 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGA12O60330 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PCDHGA12O60330 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PCDHGA12O60330 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PCDHGA12O60330 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PCDHGA12O60330 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHGA12O60330 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGA12O60330 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHGA12O60330 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PCDHGA12O60330 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA12O60330 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA12O60330 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHGA12O60330 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA12O60330 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHGA12O60330 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA12O60330 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA12O60330 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHGA12O60330 TSPY15P-201ENST00000457163 923 ntBASIC19.84■□□□□ 0.77
PCDHGA12O60330 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHGA12O60330 AL355075.4-201ENST00000554988 638 ntBASIC19.84■□□□□ 0.77
PCDHGA12O60330 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHGA12O60330 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHGA12O60330 AL157384.1-201ENST00000445995 2473 ntBASIC19.84■□□□□ 0.77
PCDHGA12O60330 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
PCDHGA12O60330 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA12O60330 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA12O60330 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.84■□□□□ 0.77
PCDHGA12O60330 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA12O60330 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA12O60330 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA12O60330 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PCDHGA12O60330 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHGA12O60330 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PCDHGA12O60330 AF106564.1-201ENST00000607058 2553 ntBASIC19.83■□□□□ 0.77
PCDHGA12O60330 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHGA12O60330 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.83■□□□□ 0.77
PCDHGA12O60330 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.83■□□□□ 0.77
PCDHGA12O60330 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA12O60330 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHGA12O60330 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHGA12O60330 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHGA12O60330 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHGA12O60330 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.83■□□□□ 0.76
PCDHGA12O60330 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGA12O60330 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGA12O60330 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGA12O60330 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGA12O60330 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms