Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
VEGFDO43915 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
VEGFDO43915 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VEGFDO43915 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
VEGFDO43915 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VEGFDO43915 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VEGFDO43915 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VEGFDO43915 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VEGFDO43915 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
VEGFDO43915 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VEGFDO43915 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VEGFDO43915 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VEGFDO43915 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VEGFDO43915 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VEGFDO43915 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VEGFDO43915 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VEGFDO43915 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VEGFDO43915 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VEGFDO43915 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VEGFDO43915 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VEGFDO43915 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VEGFDO43915 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
VEGFDO43915 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VEGFDO43915 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.66■□□□□ 0.74
VEGFDO43915 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.66■□□□□ 0.74
VEGFDO43915 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.66■□□□□ 0.74
VEGFDO43915 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VEGFDO43915 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.66■□□□□ 0.74
VEGFDO43915 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VEGFDO43915 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.66■□□□□ 0.74
VEGFDO43915 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VEGFDO43915 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
VEGFDO43915 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VEGFDO43915 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.66■□□□□ 0.74
VEGFDO43915 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VEGFDO43915 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
VEGFDO43915 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VEGFDO43915 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VEGFDO43915 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.65■□□□□ 0.74
VEGFDO43915 AL162377.1-201ENST00000618844 1793 ntBASIC19.65■□□□□ 0.74
VEGFDO43915 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VEGFDO43915 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VEGFDO43915 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.65■□□□□ 0.74
VEGFDO43915 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VEGFDO43915 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VEGFDO43915 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.65■□□□□ 0.74
VEGFDO43915 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VEGFDO43915 AL121829.2-201ENST00000620908 328 ntBASIC19.65■□□□□ 0.74
VEGFDO43915 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
VEGFDO43915 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VEGFDO43915 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VEGFDO43915 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VEGFDO43915 BX119927.1-201ENST00000636596 1552 ntBASIC19.65■□□□□ 0.74
VEGFDO43915 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.65■□□□□ 0.74
VEGFDO43915 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
VEGFDO43915 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
VEGFDO43915 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VEGFDO43915 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
VEGFDO43915 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VEGFDO43915 PRORSD1P-201ENST00000295112 541 ntBASIC19.64■□□□□ 0.73
VEGFDO43915 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
VEGFDO43915 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.64■□□□□ 0.73
VEGFDO43915 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.64■□□□□ 0.73
VEGFDO43915 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.64■□□□□ 0.73
VEGFDO43915 RN7SL471P-201ENST00000580476 299 ntBASIC19.64■□□□□ 0.73
VEGFDO43915 AL121906.2-201ENST00000621597 723 ntBASIC19.64■□□□□ 0.73
VEGFDO43915 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VEGFDO43915 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.64■□□□□ 0.73
VEGFDO43915 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VEGFDO43915 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VEGFDO43915 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VEGFDO43915 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.64■□□□□ 0.73
VEGFDO43915 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
VEGFDO43915 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.64■□□□□ 0.73
VEGFDO43915 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.64■□□□□ 0.73
VEGFDO43915 AL512408.1-201ENST00000569378 2000 ntBASIC19.64■□□□□ 0.73
VEGFDO43915 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VEGFDO43915 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VEGFDO43915 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VEGFDO43915 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VEGFDO43915 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
VEGFDO43915 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VEGFDO43915 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.63■□□□□ 0.73
VEGFDO43915 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
VEGFDO43915 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VEGFDO43915 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
VEGFDO43915 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VEGFDO43915 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VEGFDO43915 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.63■□□□□ 0.73
VEGFDO43915 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
VEGFDO43915 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.63■□□□□ 0.73
VEGFDO43915 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.63■□□□□ 0.73
VEGFDO43915 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.63■□□□□ 0.73
VEGFDO43915 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VEGFDO43915 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.63■□□□□ 0.73
VEGFDO43915 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VEGFDO43915 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.63■□□□□ 0.73
VEGFDO43915 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VEGFDO43915 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.63■□□□□ 0.73
VEGFDO43915 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms