Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.48■□□□□ 0.55
ARHGEF9O43307 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.48■□□□□ 0.55
ARHGEF9O43307 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.48■□□□□ 0.55
ARHGEF9O43307 AC104187.1-201ENST00000607510 612 ntBASIC18.48■□□□□ 0.55
ARHGEF9O43307 AC007225.1-201ENST00000566331 1836 ntBASIC18.48■□□□□ 0.55
ARHGEF9O43307 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARHGEF9O43307 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.48■□□□□ 0.55
ARHGEF9O43307 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.48■□□□□ 0.55
ARHGEF9O43307 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARHGEF9O43307 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARHGEF9O43307 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARHGEF9O43307 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF9O43307 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF9O43307 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF9O43307 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ARHGEF9O43307 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF9O43307 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
ARHGEF9O43307 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF9O43307 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF9O43307 AC010141.2-201ENST00000452426 721 ntBASIC18.47■□□□□ 0.55
ARHGEF9O43307 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.47■□□□□ 0.55
ARHGEF9O43307 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.47■□□□□ 0.55
ARHGEF9O43307 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.47■□□□□ 0.55
ARHGEF9O43307 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF9O43307 AC066615.1-201ENST00000640911 628 ntBASIC18.47■□□□□ 0.55
ARHGEF9O43307 AC011484.1-201ENST00000377652 1995 ntBASIC18.47■□□□□ 0.55
ARHGEF9O43307 AC073314.1-201ENST00000568729 2216 ntBASIC18.47■□□□□ 0.55
ARHGEF9O43307 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF9O43307 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF9O43307 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
ARHGEF9O43307 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ARHGEF9O43307 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF9O43307 KRT16P2-201ENST00000414673 1423 ntBASIC18.47■□□□□ 0.55
ARHGEF9O43307 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF9O43307 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF9O43307 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.47■□□□□ 0.55
ARHGEF9O43307 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF9O43307 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARHGEF9O43307 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
ARHGEF9O43307 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF9O43307 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF9O43307 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF9O43307 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
ARHGEF9O43307 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF9O43307 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF9O43307 FP700111.2-201ENST00000619190 1892 ntBASIC18.46■□□□□ 0.55
ARHGEF9O43307 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF9O43307 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ARHGEF9O43307 AC142086.2-201ENST00000569753 217 ntBASIC18.46■□□□□ 0.55
ARHGEF9O43307 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.46■□□□□ 0.55
ARHGEF9O43307 AC231657.2-201ENST00000624556 255 ntBASIC18.46■□□□□ 0.55
ARHGEF9O43307 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ARHGEF9O43307 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ARHGEF9O43307 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ARHGEF9O43307 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ARHGEF9O43307 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.45■□□□□ 0.54
ARHGEF9O43307 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ARHGEF9O43307 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ARHGEF9O43307 SLC29A4P1-201ENST00000398760 971 ntBASIC18.45■□□□□ 0.54
ARHGEF9O43307 AC245052.3-201ENST00000450182 901 ntBASIC18.45■□□□□ 0.54
ARHGEF9O43307 TSPY20P-201ENST00000450910 630 ntBASIC18.45■□□□□ 0.54
ARHGEF9O43307 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.45■□□□□ 0.54
ARHGEF9O43307 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.45■□□□□ 0.54
ARHGEF9O43307 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ARHGEF9O43307 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.45■□□□□ 0.54
ARHGEF9O43307 AP001160.3-201ENST00000601484 763 ntBASIC18.45■□□□□ 0.54
ARHGEF9O43307 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
ARHGEF9O43307 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ARHGEF9O43307 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.45■□□□□ 0.54
ARHGEF9O43307 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.45■□□□□ 0.54
ARHGEF9O43307 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ARHGEF9O43307 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ARHGEF9O43307 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.44■□□□□ 0.54
ARHGEF9O43307 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ARHGEF9O43307 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.44■□□□□ 0.54
ARHGEF9O43307 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ARHGEF9O43307 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ARHGEF9O43307 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ARHGEF9O43307 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms