Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NDUFA1O15239 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
NDUFA1O15239 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.68□□□□□ -0.22
NDUFA1O15239 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.68□□□□□ -0.22
NDUFA1O15239 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC13.68□□□□□ -0.22
NDUFA1O15239 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.68□□□□□ -0.22
NDUFA1O15239 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC13.68□□□□□ -0.22
NDUFA1O15239 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NDUFA1O15239 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
NDUFA1O15239 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.67□□□□□ -0.22
NDUFA1O15239 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.67□□□□□ -0.22
NDUFA1O15239 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
NDUFA1O15239 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.67□□□□□ -0.22
NDUFA1O15239 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NDUFA1O15239 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.67□□□□□ -0.22
NDUFA1O15239 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NDUFA1O15239 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.67□□□□□ -0.22
NDUFA1O15239 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.67□□□□□ -0.22
NDUFA1O15239 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NDUFA1O15239 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC13.67□□□□□ -0.22
NDUFA1O15239 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC13.67□□□□□ -0.22
NDUFA1O15239 AC012414.1-201ENST00000556676 535 ntBASIC13.67□□□□□ -0.22
NDUFA1O15239 EEF1DP3-203ENST00000566025 782 ntBASIC13.67□□□□□ -0.22
NDUFA1O15239 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.67□□□□□ -0.22
NDUFA1O15239 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.67□□□□□ -0.22
NDUFA1O15239 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.67□□□□□ -0.22
NDUFA1O15239 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC13.67□□□□□ -0.22
NDUFA1O15239 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
NDUFA1O15239 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
NDUFA1O15239 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFA1O15239 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
NDUFA1O15239 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NDUFA1O15239 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NDUFA1O15239 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.66□□□□□ -0.22
NDUFA1O15239 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.66□□□□□ -0.22
NDUFA1O15239 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NDUFA1O15239 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NDUFA1O15239 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.66□□□□□ -0.22
NDUFA1O15239 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC13.66□□□□□ -0.22
NDUFA1O15239 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 AC110285.6-201ENST00000617652 491 ntBASIC13.66□□□□□ -0.22
NDUFA1O15239 AL358852.1-201ENST00000623174 1268 ntBASIC13.66□□□□□ -0.22
NDUFA1O15239 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.66□□□□□ -0.22
NDUFA1O15239 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NDUFA1O15239 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
NDUFA1O15239 AC093484.2-201ENST00000580996 2166 ntBASIC13.66□□□□□ -0.22
NDUFA1O15239 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NDUFA1O15239 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NDUFA1O15239 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFA1O15239 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
NDUFA1O15239 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC13.66□□□□□ -0.22
NDUFA1O15239 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms