Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.2■□□□□ 0.66
SPTBN2O15020 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPTBN2O15020 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.2■□□□□ 0.66
SPTBN2O15020 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPTBN2O15020 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SPTBN2O15020 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
SPTBN2O15020 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPTBN2O15020 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.2■□□□□ 0.66
SPTBN2O15020 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPTBN2O15020 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SPTBN2O15020 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.19■□□□□ 0.66
SPTBN2O15020 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.19■□□□□ 0.66
SPTBN2O15020 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.19■□□□□ 0.66
SPTBN2O15020 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTBN2O15020 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.19■□□□□ 0.66
SPTBN2O15020 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTBN2O15020 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SPTBN2O15020 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.19■□□□□ 0.66
SPTBN2O15020 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.19■□□□□ 0.66
SPTBN2O15020 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.19■□□□□ 0.66
SPTBN2O15020 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.19■□□□□ 0.66
SPTBN2O15020 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.19■□□□□ 0.66
SPTBN2O15020 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTBN2O15020 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
SPTBN2O15020 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.19■□□□□ 0.66
SPTBN2O15020 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SPTBN2O15020 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTBN2O15020 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTBN2O15020 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SPTBN2O15020 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTBN2O15020 MIR3652-201ENST00000579335 131 ntBASIC19.18■□□□□ 0.66
SPTBN2O15020 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SPTBN2O15020 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.18■□□□□ 0.66
SPTBN2O15020 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTBN2O15020 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.18■□□□□ 0.66
SPTBN2O15020 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.18■□□□□ 0.66
SPTBN2O15020 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.18■□□□□ 0.66
SPTBN2O15020 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.18■□□□□ 0.66
SPTBN2O15020 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.18■□□□□ 0.66
SPTBN2O15020 DGCR10-201ENST00000609839 495 ntBASIC19.18■□□□□ 0.66
SPTBN2O15020 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
SPTBN2O15020 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTBN2O15020 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTBN2O15020 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SPTBN2O15020 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN2O15020 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN2O15020 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN2O15020 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.17■□□□□ 0.66
SPTBN2O15020 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.17■□□□□ 0.66
SPTBN2O15020 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.17■□□□□ 0.66
SPTBN2O15020 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.17■□□□□ 0.66
SPTBN2O15020 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN2O15020 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.17■□□□□ 0.66
SPTBN2O15020 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.17■□□□□ 0.66
SPTBN2O15020 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN2O15020 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN2O15020 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN2O15020 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN2O15020 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.17■□□□□ 0.66
SPTBN2O15020 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SPTBN2O15020 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.17■□□□□ 0.66
SPTBN2O15020 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SPTBN2O15020 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SPTBN2O15020 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.16■□□□□ 0.66
SPTBN2O15020 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.16■□□□□ 0.66
SPTBN2O15020 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPTBN2O15020 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPTBN2O15020 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.16■□□□□ 0.66
SPTBN2O15020 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.16■□□□□ 0.66
SPTBN2O15020 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.16■□□□□ 0.66
SPTBN2O15020 IFNL4P1-201ENST00000607083 540 ntBASIC19.16■□□□□ 0.66
SPTBN2O15020 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPTBN2O15020 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.16■□□□□ 0.66
SPTBN2O15020 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.15■□□□□ 0.66
SPTBN2O15020 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTBN2O15020 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.15■□□□□ 0.66
SPTBN2O15020 HMGN1P19-201ENST00000436976 333 ntBASIC19.15■□□□□ 0.66
SPTBN2O15020 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.15■□□□□ 0.66
SPTBN2O15020 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.15■□□□□ 0.66
SPTBN2O15020 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTBN2O15020 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.15■□□□□ 0.66
SPTBN2O15020 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SPTBN2O15020 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTBN2O15020 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.15■□□□□ 0.66
SPTBN2O15020 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPTBN2O15020 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.15■□□□□ 0.66
SPTBN2O15020 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.15■□□□□ 0.66
SPTBN2O15020 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SPTBN2O15020 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.15■□□□□ 0.66
SPTBN2O15020 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTBN2O15020 AC083849.1-201ENST00000615227 514 ntBASIC19.15■□□□□ 0.66
SPTBN2O15020 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPTBN2O15020 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPTBN2O15020 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SPTBN2O15020 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPTBN2O15020 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPTBN2O15020 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.14■□□□□ 0.66
SPTBN2O15020 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.14■□□□□ 0.66
SPTBN2O15020 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.14■□□□□ 0.66
SPTBN2O15020 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms