Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3D1O14617 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3D1O14617 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3D1O14617 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3D1O14617 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.68■□□□□ 0.58
AP3D1O14617 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.68■□□□□ 0.58
AP3D1O14617 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP3D1O14617 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.68■□□□□ 0.58
AP3D1O14617 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
AP3D1O14617 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3D1O14617 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.68■□□□□ 0.58
AP3D1O14617 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
AP3D1O14617 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3D1O14617 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3D1O14617 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3D1O14617 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3D1O14617 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
AP3D1O14617 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
AP3D1O14617 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP3D1O14617 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP3D1O14617 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3D1O14617 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP3D1O14617 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
AP3D1O14617 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3D1O14617 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3D1O14617 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
AP3D1O14617 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.67■□□□□ 0.58
AP3D1O14617 DUX4L16-201ENST00000555130 1264 ntBASIC18.67■□□□□ 0.58
AP3D1O14617 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.67■□□□□ 0.58
AP3D1O14617 AC022517.1-201ENST00000592429 346 ntBASIC18.67■□□□□ 0.58
AP3D1O14617 AC016405.3-201ENST00000607710 860 ntBASIC18.67■□□□□ 0.58
AP3D1O14617 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.67■□□□□ 0.58
AP3D1O14617 AC013268.1-206ENST00000638368 961 ntBASIC18.67■□□□□ 0.58
AP3D1O14617 AC112229.1-201ENST00000639295 961 ntBASIC18.67■□□□□ 0.58
AP3D1O14617 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
AP3D1O14617 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
AP3D1O14617 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.67■□□□□ 0.58
AP3D1O14617 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP3D1O14617 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3D1O14617 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3D1O14617 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.67■□□□□ 0.58
AP3D1O14617 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3D1O14617 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3D1O14617 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3D1O14617 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3D1O14617 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.66■□□□□ 0.58
AP3D1O14617 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP3D1O14617 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3D1O14617 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
AP3D1O14617 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3D1O14617 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.66■□□□□ 0.58
AP3D1O14617 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.66■□□□□ 0.58
AP3D1O14617 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
AP3D1O14617 CNN2P6-201ENST00000439038 900 ntBASIC18.66■□□□□ 0.58
AP3D1O14617 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.66■□□□□ 0.58
AP3D1O14617 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP3D1O14617 AL591742.1-201ENST00000604433 565 ntBASIC18.66■□□□□ 0.58
AP3D1O14617 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.66■□□□□ 0.58
AP3D1O14617 SMG8-203ENST00000578922 2178 ntBASIC18.66■□□□□ 0.58
AP3D1O14617 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3D1O14617 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.66■□□□□ 0.58
AP3D1O14617 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.66■□□□□ 0.58
AP3D1O14617 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP3D1O14617 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3D1O14617 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3D1O14617 KRT8P36-201ENST00000489121 1440 ntBASIC18.66■□□□□ 0.58
AP3D1O14617 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.65■□□□□ 0.58
AP3D1O14617 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3D1O14617 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3D1O14617 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
AP3D1O14617 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3D1O14617 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3D1O14617 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3D1O14617 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.65■□□□□ 0.58
AP3D1O14617 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP3D1O14617 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.65■□□□□ 0.58
AP3D1O14617 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP3D1O14617 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3D1O14617 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3D1O14617 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
AP3D1O14617 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
AP3D1O14617 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP3D1O14617 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
AP3D1O14617 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
AP3D1O14617 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 AC007322.4-201ENST00000509611 723 ntBASIC18.64■□□□□ 0.57
AP3D1O14617 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.64■□□□□ 0.57
AP3D1O14617 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.64■□□□□ 0.57
AP3D1O14617 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 BID-214ENST00000617586 542 ntTSL 5 BASIC18.64■□□□□ 0.57
AP3D1O14617 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms