Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAFD1O14545 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAFD1O14545 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAFD1O14545 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TRAFD1O14545 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAFD1O14545 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAFD1O14545 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAFD1O14545 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAFD1O14545 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAFD1O14545 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAFD1O14545 AC087289.5-201ENST00000586076 3175 ntBASIC20.52■□□□□ 0.88
TRAFD1O14545 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAFD1O14545 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAFD1O14545 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAFD1O14545 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TRAFD1O14545 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAFD1O14545 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.52■□□□□ 0.88
TRAFD1O14545 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.52■□□□□ 0.88
TRAFD1O14545 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAFD1O14545 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAFD1O14545 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAFD1O14545 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAFD1O14545 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TRAFD1O14545 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAFD1O14545 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
TRAFD1O14545 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAFD1O14545 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAFD1O14545 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAFD1O14545 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAFD1O14545 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAFD1O14545 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TRAFD1O14545 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.52■□□□□ 0.87
TRAFD1O14545 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAFD1O14545 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAFD1O14545 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAFD1O14545 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAFD1O14545 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAFD1O14545 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAFD1O14545 AC007225.1-201ENST00000566331 1836 ntBASIC20.51■□□□□ 0.87
TRAFD1O14545 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAFD1O14545 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAFD1O14545 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRAFD1O14545 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAFD1O14545 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAFD1O14545 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAFD1O14545 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRAFD1O14545 AC083880.1-201ENST00000608266 535 ntBASIC20.51■□□□□ 0.87
TRAFD1O14545 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAFD1O14545 FP700111.2-201ENST00000619190 1892 ntBASIC20.51■□□□□ 0.87
TRAFD1O14545 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAFD1O14545 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAFD1O14545 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAFD1O14545 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAFD1O14545 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAFD1O14545 SMG8-203ENST00000578922 2178 ntBASIC20.51■□□□□ 0.87
TRAFD1O14545 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAFD1O14545 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAFD1O14545 BX323043.1-201ENST00000641006 1765 ntBASIC20.5■□□□□ 0.87
TRAFD1O14545 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAFD1O14545 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.5■□□□□ 0.87
TRAFD1O14545 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAFD1O14545 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.5■□□□□ 0.87
TRAFD1O14545 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.5■□□□□ 0.87
TRAFD1O14545 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAFD1O14545 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAFD1O14545 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAFD1O14545 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAFD1O14545 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAFD1O14545 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAFD1O14545 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAFD1O14545 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAFD1O14545 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAFD1O14545 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TRAFD1O14545 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAFD1O14545 PCDHAC2-203ENST00000615316 3011 ntBASIC20.49■□□□□ 0.87
TRAFD1O14545 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAFD1O14545 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAFD1O14545 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAFD1O14545 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TRAFD1O14545 AC097658.1-201ENST00000475555 843 ntBASIC20.49■□□□□ 0.87
TRAFD1O14545 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRAFD1O14545 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAFD1O14545 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRAFD1O14545 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRAFD1O14545 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.49■□□□□ 0.87
TRAFD1O14545 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAFD1O14545 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAFD1O14545 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAFD1O14545 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAFD1O14545 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAFD1O14545 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAFD1O14545 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAFD1O14545 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAFD1O14545 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAFD1O14545 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.48■□□□□ 0.87
TRAFD1O14545 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAFD1O14545 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
TRAFD1O14545 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAFD1O14545 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAFD1O14545 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms