Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 SLC25A1P4-201ENST00000567977 778 ntBASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 AC011558.1-201ENST00000623459 338 ntBASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 AC068473.5-201ENST00000616428 2072 ntBASIC18.93■□□□□ 0.62
C1QTNF9BB2RNN3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 TSPY21P-201ENST00000433481 731 ntBASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 TSPY23P-201ENST00000440136 739 ntBASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 AL671277.2-201ENST00000458060 996 ntBASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 RN7SL510P-201ENST00000581311 263 ntBASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF9BB2RNN3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF9BB2RNN3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.91■□□□□ 0.62
C1QTNF9BB2RNN3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.91■□□□□ 0.62
C1QTNF9BB2RNN3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF9BB2RNN3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.91■□□□□ 0.62
C1QTNF9BB2RNN3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.91■□□□□ 0.62
C1QTNF9BB2RNN3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
C1QTNF9BB2RNN3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF9BB2RNN3 DGCR10-201ENST00000609839 495 ntBASIC18.91■□□□□ 0.62
C1QTNF9BB2RNN3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.91■□□□□ 0.62
C1QTNF9BB2RNN3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.91■□□□□ 0.62
C1QTNF9BB2RNN3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF9BB2RNN3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF9BB2RNN3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF9BB2RNN3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 AL359075.1-203ENST00000462729 1002 ntBASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 B3GAT3P1-201ENST00000471720 806 ntBASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 CR769767.2-201ENST00000622735 460 ntBASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.9■□□□□ 0.62
C1QTNF9BB2RNN3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
C1QTNF9BB2RNN3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.89■□□□□ 0.62
C1QTNF9BB2RNN3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
C1QTNF9BB2RNN3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
C1QTNF9BB2RNN3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.89■□□□□ 0.61
C1QTNF9BB2RNN3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.89■□□□□ 0.61
C1QTNF9BB2RNN3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.89■□□□□ 0.61
C1QTNF9BB2RNN3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.89■□□□□ 0.61
C1QTNF9BB2RNN3 AC012676.1-201ENST00000574705 1949 ntBASIC18.89■□□□□ 0.61
C1QTNF9BB2RNN3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.89■□□□□ 0.61
C1QTNF9BB2RNN3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.89■□□□□ 0.61
C1QTNF9BB2RNN3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
C1QTNF9BB2RNN3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C1QTNF9BB2RNN3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C1QTNF9BB2RNN3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
C1QTNF9BB2RNN3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C1QTNF9BB2RNN3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
C1QTNF9BB2RNN3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.88■□□□□ 0.61
C1QTNF9BB2RNN3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C1QTNF9BB2RNN3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
C1QTNF9BB2RNN3 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.88■□□□□ 0.61
C1QTNF9BB2RNN3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.88■□□□□ 0.61
C1QTNF9BB2RNN3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.88■□□□□ 0.61
C1QTNF9BB2RNN3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.88■□□□□ 0.61
C1QTNF9BB2RNN3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.88■□□□□ 0.61
C1QTNF9BB2RNN3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.88■□□□□ 0.61
C1QTNF9BB2RNN3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.88■□□□□ 0.61
C1QTNF9BB2RNN3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms