Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.93■□□□□ 0.94
YJEFN3A6XGL0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 POM121L13P-201ENST00000422362 380 ntBASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 AC233263.1-201ENST00000578059 224 ntBASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 ITM2C-210ENST00000620962 501 ntBASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YJEFN3A6XGL0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 AC128676.1-201ENST00000454392 318 ntBASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 AC073648.6-201ENST00000641589 218 ntBASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
YJEFN3A6XGL0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 BX119927.1-201ENST00000636596 1552 ntBASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 RPS2P52-201ENST00000469610 820 ntBASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
YJEFN3A6XGL0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
YJEFN3A6XGL0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
YJEFN3A6XGL0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.89■□□□□ 0.94
YJEFN3A6XGL0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
YJEFN3A6XGL0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
YJEFN3A6XGL0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
YJEFN3A6XGL0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
YJEFN3A6XGL0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
YJEFN3A6XGL0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
YJEFN3A6XGL0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
YJEFN3A6XGL0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
YJEFN3A6XGL0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.89■□□□□ 0.93
YJEFN3A6XGL0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
YJEFN3A6XGL0 KRT18P29-201ENST00000397031 1267 ntBASIC20.89■□□□□ 0.93
YJEFN3A6XGL0 KRT17P3-201ENST00000420566 1262 ntBASIC20.89■□□□□ 0.93
YJEFN3A6XGL0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
YJEFN3A6XGL0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.89■□□□□ 0.93
YJEFN3A6XGL0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.89■□□□□ 0.93
YJEFN3A6XGL0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.89■□□□□ 0.93
YJEFN3A6XGL0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms