Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRRC53A6NM62 TREX1-205ENST00000625293 1783 ntBASIC21.59■■□□□ 1.05
LRRC53A6NM62 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC53A6NM62 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC53A6NM62 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
LRRC53A6NM62 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
LRRC53A6NM62 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC53A6NM62 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC53A6NM62 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC53A6NM62 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC53A6NM62 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC53A6NM62 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC53A6NM62 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.58■■□□□ 1.05
LRRC53A6NM62 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC53A6NM62 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC53A6NM62 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC53A6NM62 KRT18P5-201ENST00000436075 1291 ntBASIC21.58■■□□□ 1.05
LRRC53A6NM62 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.58■■□□□ 1.05
LRRC53A6NM62 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.58■■□□□ 1.05
LRRC53A6NM62 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.58■■□□□ 1.05
LRRC53A6NM62 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.58■■□□□ 1.05
LRRC53A6NM62 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRC53A6NM62 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.58■■□□□ 1.05
LRRC53A6NM62 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRRC53A6NM62 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRRC53A6NM62 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
LRRC53A6NM62 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
LRRC53A6NM62 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRRC53A6NM62 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC53A6NM62 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC53A6NM62 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC53A6NM62 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.57■■□□□ 1.04
LRRC53A6NM62 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.57■■□□□ 1.04
LRRC53A6NM62 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.57■■□□□ 1.04
LRRC53A6NM62 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.57■■□□□ 1.04
LRRC53A6NM62 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.57■■□□□ 1.04
LRRC53A6NM62 CNN2P6-201ENST00000439038 900 ntBASIC21.57■■□□□ 1.04
LRRC53A6NM62 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.57■■□□□ 1.04
LRRC53A6NM62 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC53A6NM62 RARRES2P4-201ENST00000514074 484 ntBASIC21.57■■□□□ 1.04
LRRC53A6NM62 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.57■■□□□ 1.04
LRRC53A6NM62 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC53A6NM62 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.57■■□□□ 1.04
LRRC53A6NM62 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRC53A6NM62 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.57■■□□□ 1.04
LRRC53A6NM62 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.57■■□□□ 1.04
LRRC53A6NM62 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC53A6NM62 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC53A6NM62 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC53A6NM62 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
LRRC53A6NM62 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC53A6NM62 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.56■■□□□ 1.04
LRRC53A6NM62 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.56■■□□□ 1.04
LRRC53A6NM62 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.56■■□□□ 1.04
LRRC53A6NM62 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
LRRC53A6NM62 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.56■■□□□ 1.04
LRRC53A6NM62 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.56■■□□□ 1.04
LRRC53A6NM62 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC53A6NM62 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
LRRC53A6NM62 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRC53A6NM62 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LRRC53A6NM62 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.56■■□□□ 1.04
LRRC53A6NM62 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC53A6NM62 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.55■■□□□ 1.04
LRRC53A6NM62 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC53A6NM62 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
LRRC53A6NM62 AC068338.2-201ENST00000563278 1430 ntBASIC21.55■■□□□ 1.04
LRRC53A6NM62 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC53A6NM62 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.55■■□□□ 1.04
LRRC53A6NM62 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC53A6NM62 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC53A6NM62 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC53A6NM62 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC53A6NM62 MCRIP2P1-201ENST00000394346 511 ntBASIC21.55■■□□□ 1.04
LRRC53A6NM62 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC53A6NM62 DUX4L16-201ENST00000555130 1264 ntBASIC21.55■■□□□ 1.04
LRRC53A6NM62 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.55■■□□□ 1.04
LRRC53A6NM62 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
LRRC53A6NM62 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC53A6NM62 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRRC53A6NM62 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.55■■□□□ 1.04
LRRC53A6NM62 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC53A6NM62 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC53A6NM62 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC53A6NM62 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC53A6NM62 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.54■■□□□ 1.04
LRRC53A6NM62 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC53A6NM62 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC53A6NM62 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC53A6NM62 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.54■■□□□ 1.04
LRRC53A6NM62 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.54■■□□□ 1.04
LRRC53A6NM62 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.54■■□□□ 1.04
LRRC53A6NM62 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC53A6NM62 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRC53A6NM62 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC53A6NM62 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC53A6NM62 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC53A6NM62 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LRRC53A6NM62 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.53■■□□□ 1.04
LRRC53A6NM62 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms