Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 AL158211.5-201ENST00000623583 2518 ntBASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF25A6NGN4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF25A6NGN4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF25A6NGN4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PRAMEF25A6NGN4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.77■□□□□ 0.6
PRAMEF25A6NGN4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF25A6NGN4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF25A6NGN4 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.77■□□□□ 0.6
PRAMEF25A6NGN4 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.77■□□□□ 0.6
PRAMEF25A6NGN4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PRAMEF25A6NGN4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF25A6NGN4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF25A6NGN4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PRAMEF25A6NGN4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF25A6NGN4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF25A6NGN4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRAMEF25A6NGN4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.77■□□□□ 0.59
PRAMEF25A6NGN4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 AL355802.2-201ENST00000402069 882 ntBASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 AL355472.2-201ENST00000422958 438 ntBASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 CYP2T3P-201ENST00000601990 817 ntBASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF25A6NGN4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 MIPEPP3-201ENST00000412105 444 ntBASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 BX276092.2-201ENST00000417668 665 ntBASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 PGM5P4-201ENST00000421970 445 ntBASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF25A6NGN4 KRT8P36-201ENST00000489121 1440 ntBASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 AC087633.2-202ENST00000565166 1439 ntBASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRAMEF25A6NGN4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms