Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 HTR7P1-201ENST00000538670 1336 ntBASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TBC1D3BA6NDS4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TBC1D3BA6NDS4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TBC1D3BA6NDS4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TBC1D3BA6NDS4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TBC1D3BA6NDS4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TBC1D3BA6NDS4 KRT8P20-201ENST00000423953 1409 ntBASIC20.4■□□□□ 0.86
TBC1D3BA6NDS4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.4■□□□□ 0.86
TBC1D3BA6NDS4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.4■□□□□ 0.86
TBC1D3BA6NDS4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.4■□□□□ 0.86
TBC1D3BA6NDS4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TBC1D3BA6NDS4 LINC01023-201ENST00000606054 436 ntBASIC20.4■□□□□ 0.86
TBC1D3BA6NDS4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.4■□□□□ 0.86
TBC1D3BA6NDS4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TBC1D3BA6NDS4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TBC1D3BA6NDS4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TBC1D3BA6NDS4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TBC1D3BA6NDS4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
TBC1D3BA6NDS4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TBC1D3BA6NDS4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 AF186192.3-201ENST00000583427 947 ntBASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 AC004264.1-201ENST00000608354 794 ntBASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 FP700111.2-201ENST00000619190 1892 ntBASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.39■□□□□ 0.85
TBC1D3BA6NDS4 PTBP1P-201ENST00000554374 1601 ntBASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 AL031963.3-201ENST00000606441 850 ntBASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TBC1D3BA6NDS4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TBC1D3BA6NDS4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TBC1D3BA6NDS4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.37■□□□□ 0.85
TBC1D3BA6NDS4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
TBC1D3BA6NDS4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TBC1D3BA6NDS4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TBC1D3BA6NDS4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TBC1D3BA6NDS4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TBC1D3BA6NDS4 AL353807.1-201ENST00000427475 662 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms