Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 AP005242.2-201ENST00000580065 1175 ntBASIC23.52■■□□□ 1.36
SSC5DA1L4H1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SSC5DA1L4H1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SSC5DA1L4H1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SSC5DA1L4H1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.52■■□□□ 1.36
SSC5DA1L4H1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SSC5DA1L4H1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SSC5DA1L4H1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SSC5DA1L4H1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.52■■□□□ 1.36
SSC5DA1L4H1 AC244015.2-201ENST00000616358 1861 ntBASIC23.52■■□□□ 1.36
SSC5DA1L4H1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
SSC5DA1L4H1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.52■■□□□ 1.35
SSC5DA1L4H1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.51■■□□□ 1.35
SSC5DA1L4H1 B3GAT3P1-201ENST00000471720 806 ntBASIC23.51■■□□□ 1.35
SSC5DA1L4H1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SSC5DA1L4H1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SSC5DA1L4H1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SSC5DA1L4H1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.5■■□□□ 1.35
SSC5DA1L4H1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
SSC5DA1L4H1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.5■■□□□ 1.35
SSC5DA1L4H1 AL445675.2-201ENST00000620291 557 ntBASIC23.5■■□□□ 1.35
SSC5DA1L4H1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SSC5DA1L4H1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SSC5DA1L4H1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
SSC5DA1L4H1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
SSC5DA1L4H1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SSC5DA1L4H1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SSC5DA1L4H1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SSC5DA1L4H1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SSC5DA1L4H1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC23.49■■□□□ 1.35
SSC5DA1L4H1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.49■■□□□ 1.35
SSC5DA1L4H1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SSC5DA1L4H1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.49■■□□□ 1.35
SSC5DA1L4H1 AL031985.4-201ENST00000642138 673 ntBASIC23.49■■□□□ 1.35
SSC5DA1L4H1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SSC5DA1L4H1 KRT8P20-201ENST00000423953 1409 ntBASIC23.49■■□□□ 1.35
SSC5DA1L4H1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SSC5DA1L4H1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SSC5DA1L4H1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SSC5DA1L4H1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SSC5DA1L4H1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC23.49■■□□□ 1.35
SSC5DA1L4H1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SSC5DA1L4H1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SSC5DA1L4H1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SSC5DA1L4H1 HLA-G-202ENST00000376815 851 ntBASIC23.48■■□□□ 1.35
SSC5DA1L4H1 HLA-G-203ENST00000376818 1127 ntBASIC23.48■■□□□ 1.35
SSC5DA1L4H1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SSC5DA1L4H1 ECEL1P2-202ENST00000465689 757 ntBASIC23.48■■□□□ 1.35
SSC5DA1L4H1 AC087388.1-201ENST00000571370 1112 ntBASIC23.48■■□□□ 1.35
SSC5DA1L4H1 DGCR10-201ENST00000609839 495 ntBASIC23.48■■□□□ 1.35
SSC5DA1L4H1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SSC5DA1L4H1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.48■■□□□ 1.35
SSC5DA1L4H1 Z98882.1-201ENST00000622160 2253 ntBASIC23.48■■□□□ 1.35
SSC5DA1L4H1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SSC5DA1L4H1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SSC5DA1L4H1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SSC5DA1L4H1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.48■■□□□ 1.35
SSC5DA1L4H1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC23.48■■□□□ 1.35
SSC5DA1L4H1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SSC5DA1L4H1 INGX-201ENST00000359239 846 ntBASIC23.48■■□□□ 1.35
SSC5DA1L4H1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC23.48■■□□□ 1.35
SSC5DA1L4H1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.48■■□□□ 1.35
SSC5DA1L4H1 FAM87A-204ENST00000613235 858 ntBASIC23.48■■□□□ 1.35
SSC5DA1L4H1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SSC5DA1L4H1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms