Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 IRS3P-201ENST00000223076 1006 ntBASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 AC104187.1-201ENST00000607510 612 ntBASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 TREX1-205ENST00000625293 1783 ntBASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 DUX4L2-201ENST00000561772 1275 ntBASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 AP001160.3-201ENST00000601484 763 ntBASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 DUX4L6-201ENST00000626483 1275 ntBASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 DUX4L1-201ENST00000627662 1275 ntBASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 DUX4L8-201ENST00000629013 1275 ntBASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 DUX4L3-201ENST00000630187 1275 ntBASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 DUX4L7-201ENST00000630678 1275 ntBASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 DUX4L5-201ENST00000630834 1275 ntBASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV5A0A0B4J249 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.52■□□□□ 0.08
TRAV5A0A0B4J249 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV5A0A0B4J249 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV5A0A0B4J249 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV5A0A0B4J249 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.52■□□□□ 0.08
TRAV5A0A0B4J249 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV5A0A0B4J249 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRAV5A0A0B4J249 AC091799.1-201ENST00000422823 811 ntBASIC15.52■□□□□ 0.08
TRAV5A0A0B4J249 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.52■□□□□ 0.08
TRAV5A0A0B4J249 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV5A0A0B4J249 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.52■□□□□ 0.08
TRAV5A0A0B4J249 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV5A0A0B4J249 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.52■□□□□ 0.08
TRAV5A0A0B4J249 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.52■□□□□ 0.07
TRAV5A0A0B4J249 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.52■□□□□ 0.07
TRAV5A0A0B4J249 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV5A0A0B4J249 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV5A0A0B4J249 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV5A0A0B4J249 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV5A0A0B4J249 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV5A0A0B4J249 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV5A0A0B4J249 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV5A0A0B4J249 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRAV5A0A0B4J249 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRAV5A0A0B4J249 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV5A0A0B4J249 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV5A0A0B4J249 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV5A0A0B4J249 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 AC007322.3-201ENST00000426526 701 ntBASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 SUDS3P1-201ENST00000505831 966 ntBASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms