Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV13-2A0A0B4J235 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 TFPT-201ENST00000391757 774 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 AL117332.1-201ENST00000622628 974 ntBASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 BX005040.4-201ENST00000637145 1518 ntBASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV13-2A0A0B4J235 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 CROCCP1-201ENST00000426910 5675 ntBASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 AC055733.4-201ENST00000638462 1354 ntBASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 BX664725.1-201ENST00000438252 379 ntBASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 MTDHP2-201ENST00000601468 714 ntBASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 AL138781.2-201ENST00000617896 1843 ntBASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV13-2A0A0B4J235 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 CD72-202ENST00000378430 585 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 RARRES2P2-201ENST00000394842 485 ntBASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV13-2A0A0B4J235 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
TRAV13-2A0A0B4J235 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV13-2A0A0B4J235 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC13.21□□□□□ -0.3
TRAV13-2A0A0B4J235 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.21□□□□□ -0.3
TRAV13-2A0A0B4J235 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV13-2A0A0B4J235 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC13.21□□□□□ -0.3
TRAV13-2A0A0B4J235 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TRAV13-2A0A0B4J235 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV13-2A0A0B4J235 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms