Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 AC073210.2-201ENST00000430369 194 ntBASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 GUSBP6-202ENST00000438529 1198 ntBASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 AC023632.3-201ENST00000521633 145 ntBASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV2A0A0B4J234 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 AL109923.1-201ENST00000618799 583 ntBASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 AC073314.1-201ENST00000568729 2216 ntBASIC15.11■□□□□ 0.01
TRAV2A0A0B4J234 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV2A0A0B4J234 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms