Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV7-1A0A0A6YYK4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRBV7-1A0A0A6YYK4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-1A0A0A6YYK4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-1A0A0A6YYK4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRBV7-1A0A0A6YYK4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-1A0A0A6YYK4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
TRBV7-1A0A0A6YYK4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-1A0A0A6YYK4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-1A0A0A6YYK4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-1A0A0A6YYK4 BX119927.1-201ENST00000636596 1552 ntBASIC15.57■□□□□ 0.08
TRBV7-1A0A0A6YYK4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-1A0A0A6YYK4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-1A0A0A6YYK4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-1A0A0A6YYK4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 MIPEPP3-201ENST00000412105 444 ntBASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 PTBP1P-201ENST00000554374 1601 ntBASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-1A0A0A6YYK4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 MIR4758-201ENST00000577688 71 ntBASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 AC092118.2-201ENST00000613495 667 ntBASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV7-1A0A0A6YYK4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TSPY6P-201ENST00000448518 926 ntBASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRBV7-1A0A0A6YYK4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms