Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV26-1A0A087WT03 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV26-1A0A087WT03 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV26-1A0A087WT03 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV26-1A0A087WT03 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV26-1A0A087WT03 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV26-1A0A087WT03 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV26-1A0A087WT03 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV26-1A0A087WT03 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV26-1A0A087WT03 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 AC083906.2-201ENST00000511578 360 ntBASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 AC133552.2-202ENST00000575694 574 ntBASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV26-1A0A087WT03 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 NCF1B-203ENST00000435988 1254 ntBASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV26-1A0A087WT03 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 MKRN4P-201ENST00000444706 1521 ntBASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 SLC29A4P1-201ENST00000398760 971 ntBASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 AC093787.1-201ENST00000450396 207 ntBASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 AL109923.1-201ENST00000618799 583 ntBASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
TRAV26-1A0A087WT03 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms