Protein–RNA interactions for Protein: A0A075B6L6

TRBV7-3, T-cell receptor beta variable 7-3 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-3A0A075B6L6 AC099778.1-201ENST00000568593 1911 ntBASIC14.37□□□□□ -0.11
TRBV7-3A0A075B6L6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 NEFHP1-201ENST00000412845 2629 ntBASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 AC243732.1-201ENST00000612648 864 ntBASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV7-3A0A075B6L6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 SLC7A5P1-201ENST00000568957 537 ntBASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.35□□□□□ -0.11
TRBV7-3A0A075B6L6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 AC007322.3-201ENST00000426526 701 ntBASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 KRT18P14-201ENST00000534205 1250 ntBASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV7-3A0A075B6L6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TRBV7-3A0A075B6L6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
TRBV7-3A0A075B6L6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.33□□□□□ -0.11
TRBV7-3A0A075B6L6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV7-3A0A075B6L6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
TRBV7-3A0A075B6L6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV7-3A0A075B6L6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV7-3A0A075B6L6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV7-3A0A075B6L6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV7-3A0A075B6L6 KRT19P1-201ENST00000405746 1186 ntBASIC14.33□□□□□ -0.12
TRBV7-3A0A075B6L6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRBV7-3A0A075B6L6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV7-3A0A075B6L6 FAM21FP-204ENST00000608637 956 ntBASIC14.33□□□□□ -0.12
TRBV7-3A0A075B6L6 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV7-3A0A075B6L6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV7-3A0A075B6L6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms