Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 TRPC3-201ENST00000264811 3675 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 TSNAX-201ENST00000366639 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 NAA16-201ENST00000379406 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 CPA2-201ENST00000222481 1366 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 SZRD1-202ENST00000401089 3447 ntTSL 2 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 SEPT4-202ENST00000317268 1784 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 AC007038.1-201ENST00000452057 2199 ntTSL 2 BASIC9.6□□□□□ -0.87
LRCH3Q96II8 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 SAXO2-201ENST00000339465 3134 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LRCH3Q96II8 PC-201ENST00000393955 4004 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 VSIG4-202ENST00000412866 1474 ntTSL 2 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 MOBP-202ENST00000383754 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 ISX-202ENST00000404699 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 EAPP-201ENST00000250454 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 CNOT4-212ENST00000541284 3563 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 KIF5A-202ENST00000455537 5824 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 DNAJC16-203ENST00000375849 3446 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 SIN3A-201ENST00000360439 5050 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 AL354732.1-201ENST00000416416 2080 ntTSL 5 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 TARID-209ENST00000630119 4294 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 FSD1L-203ENST00000394926 1947 ntTSL 5 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 CHODL-204ENST00000400128 2421 ntTSL 2 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 DEFA5-201ENST00000330590 449 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 RPL17P50-201ENST00000396131 546 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 AL122008.2-201ENST00000412915 570 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 RPL19P21-201ENST00000424919 591 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 KATNBL1P6-201ENST00000453433 915 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 RPS20P24-201ENST00000457473 361 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC092989.1-201ENST00000481235 277 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 RN7SL65P-201ENST00000485221 315 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 NAP1L1P1-201ENST00000524793 1063 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC023080.1-201ENST00000551663 931 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 HIF1A-AS2-201ENST00000554254 533 ntTSL 3 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC091489.2-201ENST00000566263 604 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 AL356986.1-201ENST00000604085 341 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC135507.2-201ENST00000612443 309 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC025594.3-201ENST00000613068 790 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC074029.3-201ENST00000618623 312 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 AC239859.6-201ENST00000622095 213 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 MTHFD2-203ENST00000409804 1757 ntTSL 5 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 SF3A3-201ENST00000373019 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 C1orf198-202ENST00000427697 3666 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 HSPA9P1-201ENST00000432228 2029 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 EMP1-201ENST00000256951 5921 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 MRPS11-201ENST00000325844 3644 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 ABCG1-204ENST00000398437 3475 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 CKMT2-AS1-202ENST00000501927 2463 ntTSL 2 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 AP002847.1-201ENST00000625136 2245 ntBASIC9.59□□□□□ -0.87
LRCH3Q96II8 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 CASP5-202ENST00000393141 1488 ntTSL 5 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC9.59□□□□□ -0.87
LRCH3Q96II8 CEP57-202ENST00000325542 3178 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
LRCH3Q96II8 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
LRCH3Q96II8 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LRCH3Q96II8 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LRCH3Q96II8 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
LRCH3Q96II8 DCTN1-205ENST00000409567 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
LRCH3Q96II8 CD200-201ENST00000315711 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LRCH3Q96II8 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LRCH3Q96II8 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LRCH3Q96II8 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LRCH3Q96II8 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
LRCH3Q96II8 RNU1-120P-201ENST00000363009 157 ntBASIC9.58□□□□□ -0.88
LRCH3Q96II8 RPL23AP59-201ENST00000399415 461 ntBASIC9.58□□□□□ -0.88
LRCH3Q96II8 OR8B1P-201ENST00000419328 918 ntBASIC9.58□□□□□ -0.88
LRCH3Q96II8 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms