Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 RPS21P8-201ENST00000413365 247 ntBASIC6.28□□□□□ -1.4
HLA-DQB1P01920 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 GNAI2P2-201ENST00000417003 916 ntBASIC6.28□□□□□ -1.4
HLA-DQB1P01920 RPL7AP72-201ENST00000417266 768 ntBASIC6.28□□□□□ -1.4
HLA-DQB1P01920 AC004129.1-201ENST00000417617 796 ntBASIC6.28□□□□□ -1.4
HLA-DQB1P01920 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 SS18L2P1-201ENST00000445923 213 ntBASIC6.28□□□□□ -1.4
HLA-DQB1P01920 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 AL034399.1-201ENST00000451535 380 ntBASIC6.28□□□□□ -1.4
HLA-DQB1P01920 AC114755.1-201ENST00000453101 868 ntBASIC6.28□□□□□ -1.4
HLA-DQB1P01920 RN7SL55P-201ENST00000464534 297 ntBASIC6.28□□□□□ -1.4
HLA-DQB1P01920 AC120057.1-201ENST00000483947 663 ntBASIC6.28□□□□□ -1.4
HLA-DQB1P01920 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 SUMO2P19-201ENST00000518920 295 ntBASIC6.28□□□□□ -1.4
HLA-DQB1P01920 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 AC244131.1-201ENST00000542152 922 ntBASIC6.28□□□□□ -1.4
HLA-DQB1P01920 ANAPC15-213ENST00000543050 807 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 OR7A18P-201ENST00000600416 277 ntBASIC6.28□□□□□ -1.4
HLA-DQB1P01920 AC008592.5-201ENST00000607856 547 ntBASIC6.28□□□□□ -1.4
HLA-DQB1P01920 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 FAM240B-202ENST00000637691 966 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 AC027313.1-201ENST00000509159 1666 ntBASIC6.28□□□□□ -1.4
HLA-DQB1P01920 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DQB1P01920 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.4
HLA-DQB1P01920 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
HLA-DQB1P01920 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.4
HLA-DQB1P01920 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.27□□□□□ -1.41
HLA-DQB1P01920 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 AC007938.1-201ENST00000562524 2902 ntBASIC6.27□□□□□ -1.41
HLA-DQB1P01920 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 AL731537.1-201ENST00000343087 421 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 PKMP3-201ENST00000405497 715 ntBASIC6.27□□□□□ -1.41
HLA-DQB1P01920 VN1R13P-201ENST00000406212 885 ntBASIC6.27□□□□□ -1.41
HLA-DQB1P01920 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 STSP1-201ENST00000412493 1151 ntBASIC6.27□□□□□ -1.41
HLA-DQB1P01920 RBMY2FP-202ENST00000420346 1263 ntBASIC6.27□□□□□ -1.41
HLA-DQB1P01920 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 RPL7P7-201ENST00000428803 703 ntBASIC6.27□□□□□ -1.41
HLA-DQB1P01920 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC6.27□□□□□ -1.41
HLA-DQB1P01920 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms