Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.87□□□□□ -1.15
MTHFRP42898 AL161891.1-201ENST00000621575 4636 ntBASIC7.87□□□□□ -1.15
MTHFRP42898 AC010886.1-201ENST00000437380 2869 ntBASIC7.87□□□□□ -1.15
MTHFRP42898 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.87□□□□□ -1.15
MTHFRP42898 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
MTHFRP42898 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
MTHFRP42898 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
MTHFRP42898 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
MTHFRP42898 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.87□□□□□ -1.15
MTHFRP42898 AL080317.3-201ENST00000607434 4315 ntBASIC7.87□□□□□ -1.15
MTHFRP42898 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
MTHFRP42898 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.87□□□□□ -1.15
MTHFRP42898 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.86□□□□□ -1.15
MTHFRP42898 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
MTHFRP42898 AP000766.1-201ENST00000561746 4140 ntBASIC7.86□□□□□ -1.15
MTHFRP42898 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
MTHFRP42898 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
MTHFRP42898 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
MTHFRP42898 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
MTHFRP42898 PARP1P1-201ENST00000413631 3026 ntBASIC7.86□□□□□ -1.15
MTHFRP42898 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.86□□□□□ -1.15
MTHFRP42898 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
MTHFRP42898 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.86□□□□□ -1.15
MTHFRP42898 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
MTHFRP42898 RNU4-81P-201ENST00000363561 144 ntBASIC7.86□□□□□ -1.15
MTHFRP42898 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
MTHFRP42898 SSX6-201ENST00000376932 562 ntBASIC7.86□□□□□ -1.15
MTHFRP42898 RN7SKP261-201ENST00000410948 278 ntBASIC7.86□□□□□ -1.15
MTHFRP42898 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC7.86□□□□□ -1.15
MTHFRP42898 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.86□□□□□ -1.15
MTHFRP42898 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.86□□□□□ -1.15
MTHFRP42898 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC7.86□□□□□ -1.15
MTHFRP42898 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC7.86□□□□□ -1.15
MTHFRP42898 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.86□□□□□ -1.15
MTHFRP42898 RN7SL149P-201ENST00000465197 281 ntBASIC7.86□□□□□ -1.15
MTHFRP42898 OR9A1P-202ENST00000484361 945 ntBASIC7.86□□□□□ -1.15
MTHFRP42898 AC008799.2-201ENST00000484429 647 ntBASIC7.86□□□□□ -1.15
MTHFRP42898 AC079594.1-201ENST00000489757 331 ntBASIC7.86□□□□□ -1.15
MTHFRP42898 AC107952.1-201ENST00000524200 376 ntBASIC7.86□□□□□ -1.15
MTHFRP42898 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
MTHFRP42898 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.86□□□□□ -1.15
MTHFRP42898 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.86□□□□□ -1.15
MTHFRP42898 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC7.86□□□□□ -1.15
MTHFRP42898 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.86□□□□□ -1.15
MTHFRP42898 AC244517.3-201ENST00000616254 1235 ntBASIC7.86□□□□□ -1.15
MTHFRP42898 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
MTHFRP42898 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.86□□□□□ -1.15
MTHFRP42898 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC7.86□□□□□ -1.15
MTHFRP42898 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
MTHFRP42898 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
MTHFRP42898 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
MTHFRP42898 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
MTHFRP42898 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC7.86□□□□□ -1.15
MTHFRP42898 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
MTHFRP42898 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
MTHFRP42898 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.85□□□□□ -1.15
MTHFRP42898 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
MTHFRP42898 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
MTHFRP42898 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.85□□□□□ -1.15
MTHFRP42898 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
MTHFRP42898 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
MTHFRP42898 RNU12-2P-201ENST00000364789 156 ntBASIC7.85□□□□□ -1.15
MTHFRP42898 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC7.85□□□□□ -1.15
MTHFRP42898 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
MTHFRP42898 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC7.85□□□□□ -1.15
MTHFRP42898 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.85□□□□□ -1.15
MTHFRP42898 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.85□□□□□ -1.15
MTHFRP42898 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.85□□□□□ -1.15
MTHFRP42898 AL031736.1-201ENST00000449688 618 ntBASIC7.85□□□□□ -1.15
MTHFRP42898 YAP1P2-201ENST00000455104 610 ntBASIC7.85□□□□□ -1.15
MTHFRP42898 RN7SL649P-201ENST00000496974 275 ntBASIC7.85□□□□□ -1.15
MTHFRP42898 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.85□□□□□ -1.15
MTHFRP42898 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.85□□□□□ -1.15
MTHFRP42898 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC7.85□□□□□ -1.15
MTHFRP42898 AC096661.1-201ENST00000515870 822 ntBASIC7.85□□□□□ -1.15
MTHFRP42898 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.85□□□□□ -1.15
MTHFRP42898 SERPINA9-208ENST00000546329 1156 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
MTHFRP42898 RN7SL32P-201ENST00000580514 281 ntBASIC7.85□□□□□ -1.15
MTHFRP42898 GLUD1P2-201ENST00000583339 201 ntBASIC7.85□□□□□ -1.15
MTHFRP42898 GLUD1P8-201ENST00000585063 203 ntBASIC7.85□□□□□ -1.15
MTHFRP42898 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.85□□□□□ -1.15
MTHFRP42898 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.85□□□□□ -1.15
MTHFRP42898 AL096855.2-201ENST00000605785 369 ntBASIC7.85□□□□□ -1.15
MTHFRP42898 AC113361.1-201ENST00000606683 543 ntBASIC7.85□□□□□ -1.15
MTHFRP42898 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.85□□□□□ -1.15
MTHFRP42898 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.85□□□□□ -1.15
MTHFRP42898 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.85□□□□□ -1.15
MTHFRP42898 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
MTHFRP42898 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
MTHFRP42898 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.85□□□□□ -1.15
MTHFRP42898 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.85□□□□□ -1.15
MTHFRP42898 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
MTHFRP42898 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.85□□□□□ -1.15
MTHFRP42898 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
MTHFRP42898 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
MTHFRP42898 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
MTHFRP42898 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.84□□□□□ -1.15
MTHFRP42898 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
MTHFRP42898 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7.84□□□□□ -1.15
MTHFRP42898 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms