Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SSX3Q99909 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 MELK-208ENST00000536987 2125 ntTSL 2 BASIC6.41□□□□□ -1.38
SSX3Q99909 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SSX3Q99909 SALL1P1-201ENST00000438101 3837 ntBASIC6.41□□□□□ -1.38
SSX3Q99909 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.41□□□□□ -1.38
SSX3Q99909 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC6.41□□□□□ -1.38
SSX3Q99909 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SSX3Q99909 LRRC2-AS1-201ENST00000599511 2291 ntBASIC6.41□□□□□ -1.38
SSX3Q99909 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
SSX3Q99909 XRCC6P3-201ENST00000422187 1621 ntBASIC6.41□□□□□ -1.38
SSX3Q99909 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 EEF1AKMT1-202ENST00000382758 1042 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 AL590143.1-201ENST00000405071 138 ntBASIC6.41□□□□□ -1.38
SSX3Q99909 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX3Q99909 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX3Q99909 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.41□□□□□ -1.38
SSX3Q99909 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX3Q99909 RBM22P5-201ENST00000449536 1277 ntBASIC6.41□□□□□ -1.38
SSX3Q99909 AC013439.1-201ENST00000449965 1239 ntBASIC6.41□□□□□ -1.38
SSX3Q99909 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX3Q99909 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.41□□□□□ -1.38
SSX3Q99909 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC6.41□□□□□ -1.38
SSX3Q99909 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC6.41□□□□□ -1.38
SSX3Q99909 OR7E158P-201ENST00000524483 910 ntBASIC6.41□□□□□ -1.38
SSX3Q99909 AP000873.4-201ENST00000528133 905 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX3Q99909 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.41□□□□□ -1.38
SSX3Q99909 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC6.41□□□□□ -1.38
SSX3Q99909 AC006065.2-201ENST00000536978 211 ntBASIC6.41□□□□□ -1.38
SSX3Q99909 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX3Q99909 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC6.41□□□□□ -1.38
SSX3Q99909 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX3Q99909 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX3Q99909 LINC02544-201ENST00000564830 544 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 RN7SL311P-201ENST00000579858 306 ntBASIC6.41□□□□□ -1.38
SSX3Q99909 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 AC073911.1-201ENST00000592296 504 ntTSL 5 BASIC6.41□□□□□ -1.38
SSX3Q99909 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC6.41□□□□□ -1.38
SSX3Q99909 AP000436.1-201ENST00000605239 800 ntBASIC6.41□□□□□ -1.38
SSX3Q99909 U1.22-201ENST00000605806 164 ntBASIC6.41□□□□□ -1.38
SSX3Q99909 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX3Q99909 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC6.41□□□□□ -1.38
SSX3Q99909 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.41□□□□□ -1.38
SSX3Q99909 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 AL109810.2-201ENST00000425559 1348 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
SSX3Q99909 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.41□□□□□ -1.38
SSX3Q99909 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.41□□□□□ -1.38
SSX3Q99909 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.41□□□□□ -1.38
SSX3Q99909 AL049869.1-201ENST00000556933 1402 ntBASIC6.41□□□□□ -1.38
SSX3Q99909 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.41□□□□□ -1.38
SSX3Q99909 CASC20-201ENST00000415932 1484 ntTSL 5 BASIC6.41□□□□□ -1.38
SSX3Q99909 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX3Q99909 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX3Q99909 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSX3Q99909 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSX3Q99909 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSX3Q99909 ZNF402P-201ENST00000404435 3100 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 AC068860.1-201ENST00000623701 3736 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 RNA5SP301-201ENST00000362537 121 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX3Q99909 MIR128-2-201ENST00000384893 84 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 RPL5P35-201ENST00000398869 816 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 FTH1P26-201ENST00000406512 701 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 RN7SKP89-201ENST00000410774 242 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 AC010983.1-201ENST00000418387 1028 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX3Q99909 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX3Q99909 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX3Q99909 GAPDHP16-201ENST00000448152 962 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 RBMY2BP-202ENST00000451071 1156 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 PYM1-204ENST00000454792 884 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX3Q99909 OR13C1P-201ENST00000457612 963 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX3Q99909 RN7SL89P-201ENST00000480252 283 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 ALG13-214ENST00000482742 620 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX3Q99909 AC107956.2-201ENST00000496042 454 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX3Q99909 MTND6P8-201ENST00000503471 522 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 GAPDHP38-201ENST00000503632 1002 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX3Q99909 ADI1P2-201ENST00000514945 429 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX3Q99909 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX3Q99909 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SSX3Q99909 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.38
SSX3Q99909 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX3Q99909 THAP2-202ENST00000547843 672 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX3Q99909 OR4N1P-201ENST00000554847 949 ntBASIC6.4□□□□□ -1.38
SSX3Q99909 AC007066.2-202ENST00000566531 914 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms