Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC135050.6-202ENST00000613584 392 ntBASIC7.84□□□□□ -1.15
APOEP02649 AC002094.5-201ENST00000623773 629 ntBASIC7.84□□□□□ -1.15
APOEP02649 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC7.84□□□□□ -1.15
APOEP02649 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.84□□□□□ -1.15
APOEP02649 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
APOEP02649 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
APOEP02649 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
APOEP02649 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.84□□□□□ -1.15
APOEP02649 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
APOEP02649 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.84□□□□□ -1.15
APOEP02649 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
APOEP02649 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
APOEP02649 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.84□□□□□ -1.15
APOEP02649 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
APOEP02649 AL357556.1-201ENST00000421884 1388 ntBASIC7.84□□□□□ -1.16
APOEP02649 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
APOEP02649 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
APOEP02649 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
APOEP02649 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 AC011592.1-201ENST00000624647 3634 ntBASIC7.83□□□□□ -1.16
APOEP02649 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.83□□□□□ -1.16
APOEP02649 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 SF3A3P1-201ENST00000446317 1477 ntBASIC7.83□□□□□ -1.16
APOEP02649 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.83□□□□□ -1.16
APOEP02649 RN7SKP211-201ENST00000363328 315 ntBASIC7.83□□□□□ -1.16
APOEP02649 SNORA30B-201ENST00000365319 129 ntBASIC7.83□□□□□ -1.16
APOEP02649 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 LST1-211ENST00000376110 433 ntTSL 3 BASIC7.83□□□□□ -1.16
APOEP02649 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 SNORA51.7-201ENST00000384171 134 ntBASIC7.83□□□□□ -1.16
APOEP02649 PTMAP8-201ENST00000397729 342 ntBASIC7.83□□□□□ -1.16
APOEP02649 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 NUS1P4-201ENST00000401550 585 ntBASIC7.83□□□□□ -1.16
APOEP02649 MIR1231-201ENST00000408101 92 ntBASIC7.83□□□□□ -1.16
APOEP02649 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.83□□□□□ -1.16
APOEP02649 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC7.83□□□□□ -1.16
APOEP02649 PHBP4-201ENST00000437447 837 ntBASIC7.83□□□□□ -1.16
APOEP02649 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.83□□□□□ -1.16
APOEP02649 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 AC097263.1-201ENST00000496795 606 ntBASIC7.83□□□□□ -1.16
APOEP02649 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC7.83□□□□□ -1.16
APOEP02649 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC7.83□□□□□ -1.16
APOEP02649 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.83□□□□□ -1.16
APOEP02649 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC7.83□□□□□ -1.16
APOEP02649 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.83□□□□□ -1.16
APOEP02649 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.83□□□□□ -1.16
APOEP02649 AL022238.3-201ENST00000609279 443 ntBASIC7.83□□□□□ -1.16
APOEP02649 CACNB2-214ENST00000612743 597 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC7.83□□□□□ -1.16
APOEP02649 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 RN7SL680P-201ENST00000620379 299 ntBASIC7.83□□□□□ -1.16
APOEP02649 AC119674.1-201ENST00000641611 1210 ntBASIC7.83□□□□□ -1.16
APOEP02649 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.83□□□□□ -1.16
APOEP02649 AL353795.1-201ENST00000439134 1775 ntBASIC7.83□□□□□ -1.16
APOEP02649 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
APOEP02649 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
APOEP02649 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
APOEP02649 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
APOEP02649 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
APOEP02649 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.83□□□□□ -1.16
APOEP02649 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.82□□□□□ -1.16
APOEP02649 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
APOEP02649 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
APOEP02649 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
APOEP02649 AL606490.2-201ENST00000457562 1330 ntBASIC7.82□□□□□ -1.16
APOEP02649 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.82□□□□□ -1.16
APOEP02649 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
APOEP02649 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
APOEP02649 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
APOEP02649 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
APOEP02649 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
APOEP02649 RN7SKP1-201ENST00000365525 307 ntBASIC7.82□□□□□ -1.16
APOEP02649 NHP2P2-201ENST00000396362 460 ntBASIC7.82□□□□□ -1.16
APOEP02649 SNORA2C-201ENST00000408564 137 ntBASIC7.82□□□□□ -1.16
APOEP02649 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.82□□□□□ -1.16
APOEP02649 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.82□□□□□ -1.16
APOEP02649 SLC25A24P1-202ENST00000434803 1220 ntBASIC7.82□□□□□ -1.16
APOEP02649 FDPSP8-201ENST00000438304 1089 ntBASIC7.82□□□□□ -1.16
APOEP02649 SNX18P9-201ENST00000440580 835 ntBASIC7.82□□□□□ -1.16
APOEP02649 RPL6P24-201ENST00000445338 864 ntBASIC7.82□□□□□ -1.16
APOEP02649 AC092570.2-201ENST00000452117 1143 ntBASIC7.82□□□□□ -1.16
APOEP02649 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC7.82□□□□□ -1.16
APOEP02649 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC7.82□□□□□ -1.16
APOEP02649 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
APOEP02649 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC7.82□□□□□ -1.16
APOEP02649 AC117383.2-201ENST00000514722 322 ntBASIC7.82□□□□□ -1.16
APOEP02649 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC7.82□□□□□ -1.16
APOEP02649 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.82□□□□□ -1.16
APOEP02649 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.82□□□□□ -1.16
APOEP02649 AC010327.2-201ENST00000587647 488 ntBASIC7.82□□□□□ -1.16
APOEP02649 OR5AH1P-201ENST00000595968 283 ntBASIC7.82□□□□□ -1.16
APOEP02649 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms