Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 AC005614.1-201ENST00000598952 3653 ntBASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DRB4X5D2U9 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AC005839.1-201ENST00000624148 3213 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 CREM-218ENST00000460270 1416 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 THAP12P7-201ENST00000520248 2290 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AL161891.1-201ENST00000621575 4636 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 TATDN2P1-201ENST00000443767 2331 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 RNU1-21P-201ENST00000363327 163 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 CES5AP1-201ENST00000400418 859 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 GSTA10P-201ENST00000412182 576 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AL022100.1-202ENST00000421214 548 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AL137074.1-201ENST00000442640 465 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AC090954.1-201ENST00000445502 361 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 KIF3AP1-201ENST00000454055 611 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AC096922.1-201ENST00000461635 651 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 RN7SL508P-201ENST00000464472 303 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 RPL5P3-201ENST00000493817 889 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 RN7SL869P-201ENST00000497032 300 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 RN7SL124P-201ENST00000498656 285 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 LINC01096-201ENST00000501050 1263 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AL445187.1-201ENST00000502685 260 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AC022296.2-201ENST00000512424 202 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AC138866.1-201ENST00000514522 497 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AP000873.4-201ENST00000528133 905 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 RN7SL237P-201ENST00000580912 287 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 MIR4642-201ENST00000583943 82 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AL021918.1-201ENST00000603933 236 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 HNRNPA1P67-201ENST00000604027 926 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AC012488.1-201ENST00000611221 640 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 5S_rRNA.20-201ENST00000612104 118 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 FAM74A6-203ENST00000615956 481 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 RN7SL820P-201ENST00000616437 299 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 CRYAB-216ENST00000616970 977 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 RPL36AP21-202ENST00000639134 430 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 AC087269.2-201ENST00000641764 975 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 BIN2P2-201ENST00000503900 1303 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 TRIM51HP-202ENST00000530412 1823 ntBASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DRB4X5D2U9 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 MELK-208ENST00000536987 2125 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DRB4X5D2U9 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms