Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AP003499.1-201ENST00000527217 574 ntBASIC7.76□□□□□ -1.17
SLC1A1P43005 OR5F2P-201ENST00000532761 941 ntBASIC7.76□□□□□ -1.17
SLC1A1P43005 DCN-207ENST00000546370 586 ntTSL 3 BASIC7.76□□□□□ -1.17
SLC1A1P43005 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC7.76□□□□□ -1.17
SLC1A1P43005 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.76□□□□□ -1.17
SLC1A1P43005 CUX2P1-201ENST00000606426 298 ntBASIC7.76□□□□□ -1.17
SLC1A1P43005 AC097381.3-201ENST00000608962 462 ntBASIC7.76□□□□□ -1.17
SLC1A1P43005 AP005329.3-201ENST00000609924 686 ntBASIC7.76□□□□□ -1.17
SLC1A1P43005 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC7.76□□□□□ -1.17
SLC1A1P43005 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC7.76□□□□□ -1.17
SLC1A1P43005 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
SLC1A1P43005 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.76□□□□□ -1.17
SLC1A1P43005 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
SLC1A1P43005 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.76□□□□□ -1.17
SLC1A1P43005 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC7.75□□□□□ -1.17
SLC1A1P43005 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.75□□□□□ -1.17
SLC1A1P43005 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
SLC1A1P43005 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
SLC1A1P43005 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
SLC1A1P43005 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.75□□□□□ -1.17
SLC1A1P43005 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 RBBP4P4-201ENST00000398588 1289 ntBASIC7.75□□□□□ -1.17
SLC1A1P43005 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC7.75□□□□□ -1.17
SLC1A1P43005 RPL4P4-201ENST00000422486 1284 ntBASIC7.75□□□□□ -1.17
SLC1A1P43005 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.75□□□□□ -1.17
SLC1A1P43005 PYHIN5P-201ENST00000431627 723 ntBASIC7.75□□□□□ -1.17
SLC1A1P43005 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 AC040975.1-201ENST00000472104 316 ntBASIC7.75□□□□□ -1.17
SLC1A1P43005 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC7.75□□□□□ -1.17
SLC1A1P43005 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.75□□□□□ -1.17
SLC1A1P43005 IGLV10-67-201ENST00000519446 325 ntBASIC7.75□□□□□ -1.17
SLC1A1P43005 AP000873.4-201ENST00000528133 905 ntTSL 3 BASIC7.75□□□□□ -1.17
SLC1A1P43005 SCARNA9-201ENST00000530422 353 ntBASIC7.75□□□□□ -1.17
SLC1A1P43005 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.75□□□□□ -1.17
SLC1A1P43005 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC7.75□□□□□ -1.17
SLC1A1P43005 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC7.75□□□□□ -1.17
SLC1A1P43005 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.75□□□□□ -1.17
SLC1A1P43005 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.75□□□□□ -1.17
SLC1A1P43005 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.75□□□□□ -1.17
SLC1A1P43005 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
SLC1A1P43005 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.75□□□□□ -1.17
SLC1A1P43005 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
SLC1A1P43005 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.75□□□□□ -1.17
SLC1A1P43005 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.75□□□□□ -1.17
SLC1A1P43005 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
SLC1A1P43005 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SLC1A1P43005 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.75□□□□□ -1.17
SLC1A1P43005 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC7.75□□□□□ -1.17
SLC1A1P43005 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.74□□□□□ -1.17
SLC1A1P43005 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SLC1A1P43005 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SLC1A1P43005 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SLC1A1P43005 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SLC1A1P43005 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
SLC1A1P43005 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
SLC1A1P43005 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC7.74□□□□□ -1.17
SLC1A1P43005 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
SLC1A1P43005 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SLC1A1P43005 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SLC1A1P43005 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.74□□□□□ -1.17
SLC1A1P43005 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.74□□□□□ -1.17
SLC1A1P43005 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SLC1A1P43005 RNU1-16P-201ENST00000365477 164 ntBASIC7.74□□□□□ -1.17
SLC1A1P43005 HMGB3P1-201ENST00000393368 573 ntBASIC7.74□□□□□ -1.17
SLC1A1P43005 MED15P8-201ENST00000411601 545 ntBASIC7.74□□□□□ -1.17
SLC1A1P43005 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.74□□□□□ -1.17
SLC1A1P43005 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
SLC1A1P43005 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SLC1A1P43005 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.74□□□□□ -1.17
SLC1A1P43005 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.74□□□□□ -1.17
SLC1A1P43005 RPL23P10-201ENST00000468780 412 ntBASIC7.74□□□□□ -1.17
SLC1A1P43005 AC084878.1-201ENST00000480555 648 ntBASIC7.74□□□□□ -1.17
SLC1A1P43005 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.74□□□□□ -1.17
SLC1A1P43005 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms