Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
NID1P14543 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.97□□□□□ -1.13
NID1P14543 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NID1P14543 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NID1P14543 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
NID1P14543 MYH2-206ENST00000622564 2379 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NID1P14543 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NID1P14543 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NID1P14543 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NID1P14543 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC7.97□□□□□ -1.13
NID1P14543 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NID1P14543 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NID1P14543 MTND4P16-201ENST00000466108 1367 ntBASIC7.97□□□□□ -1.13
NID1P14543 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
NID1P14543 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
NID1P14543 AL162632.3-201ENST00000566976 1625 ntBASIC7.96□□□□□ -1.13
NID1P14543 STAU2-AS1-201ENST00000517604 2076 ntTSL 2 BASIC7.96□□□□□ -1.13
NID1P14543 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC7.96□□□□□ -1.13
NID1P14543 EHHADH-AS1-201ENST00000417720 1416 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
NID1P14543 CCPG1-212ENST00000569205 2970 ntTSL 2 BASIC7.96□□□□□ -1.13
NID1P14543 NBPF19-202ENST00000426482 2344 ntTSL 5 BASIC7.96□□□□□ -1.13
NID1P14543 NFIA-212ENST00000485903 1674 ntTSL 5 BASIC7.96□□□□□ -1.13
NID1P14543 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
NID1P14543 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC7.96□□□□□ -1.14
NID1P14543 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
NID1P14543 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
NID1P14543 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC7.96□□□□□ -1.14
NID1P14543 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC7.96□□□□□ -1.14
NID1P14543 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC7.96□□□□□ -1.14
NID1P14543 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
NID1P14543 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
NID1P14543 Y_RNA.248-201ENST00000364501 109 ntBASIC7.96□□□□□ -1.14
NID1P14543 MIR185-201ENST00000385288 82 ntBASIC7.96□□□□□ -1.14
NID1P14543 COX6B1-202ENST00000392201 435 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
NID1P14543 MICU1-203ENST00000398763 1224 ntTSL 2 BASIC7.96□□□□□ -1.14
NID1P14543 AL590286.1-201ENST00000404178 291 ntBASIC7.96□□□□□ -1.14
NID1P14543 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
NID1P14543 RN7SKP139-201ENST00000410411 293 ntBASIC7.96□□□□□ -1.14
NID1P14543 RNU2-16P-201ENST00000410712 136 ntBASIC7.96□□□□□ -1.14
NID1P14543 SNRPGP11-201ENST00000411777 232 ntBASIC7.96□□□□□ -1.14
NID1P14543 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC7.96□□□□□ -1.14
NID1P14543 ARL2BPP3-201ENST00000421226 480 ntBASIC7.96□□□□□ -1.14
NID1P14543 AC106017.1-202ENST00000424109 428 ntTSL 5 BASIC7.96□□□□□ -1.14
NID1P14543 CFL1P7-201ENST00000424759 486 ntBASIC7.96□□□□□ -1.14
NID1P14543 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
NID1P14543 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC7.96□□□□□ -1.14
NID1P14543 AC007952.3-202ENST00000435028 428 ntTSL 5 BASIC7.96□□□□□ -1.14
NID1P14543 LINC01468-202ENST00000435813 975 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
NID1P14543 AC012501.2-201ENST00000437634 1281 ntBASIC7.96□□□□□ -1.14
NID1P14543 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC7.96□□□□□ -1.14
NID1P14543 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC7.96□□□□□ -1.14
NID1P14543 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
NID1P14543 AL158829.1-201ENST00000449258 478 ntTSL 3 BASIC7.96□□□□□ -1.14
NID1P14543 RHEBP2-201ENST00000450289 600 ntBASIC7.96□□□□□ -1.14
NID1P14543 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC7.96□□□□□ -1.14
NID1P14543 RPL7P45-201ENST00000455851 743 ntBASIC7.96□□□□□ -1.14
NID1P14543 NMNAT1P3-201ENST00000457517 888 ntBASIC7.96□□□□□ -1.14
NID1P14543 AC092691.2-201ENST00000461787 803 ntBASIC7.96□□□□□ -1.14
NID1P14543 AC004917.1-202ENST00000475791 760 ntTSL 3 BASIC7.96□□□□□ -1.14
NID1P14543 TPT1P3-201ENST00000492841 512 ntBASIC7.96□□□□□ -1.14
NID1P14543 AC068531.1-201ENST00000502398 195 ntBASIC7.96□□□□□ -1.14
NID1P14543 IGHV3-36-201ENST00000520848 401 ntBASIC7.96□□□□□ -1.14
NID1P14543 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.96□□□□□ -1.14
NID1P14543 AC091939.1-201ENST00000522704 691 ntTSL 3 BASIC7.96□□□□□ -1.14
NID1P14543 IGKV3-25-201ENST00000523155 253 ntBASIC7.96□□□□□ -1.14
NID1P14543 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC7.96□□□□□ -1.14
NID1P14543 AC090115.2-201ENST00000548060 883 ntBASIC7.96□□□□□ -1.14
NID1P14543 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
NID1P14543 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC7.96□□□□□ -1.14
NID1P14543 AC010650.1-201ENST00000567559 494 ntBASIC7.96□□□□□ -1.14
NID1P14543 PDLIM1P3-201ENST00000582370 599 ntBASIC7.96□□□□□ -1.14
NID1P14543 AC015911.8-201ENST00000592517 560 ntBASIC7.96□□□□□ -1.14
NID1P14543 AC004221.1-201ENST00000592843 844 ntTSL 5 BASIC7.96□□□□□ -1.14
NID1P14543 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC7.96□□□□□ -1.14
NID1P14543 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC7.96□□□□□ -1.14
NID1P14543 C1orf186-208ENST00000603378 614 ntTSL 3 BASIC7.96□□□□□ -1.14
NID1P14543 AL133351.4-201ENST00000604204 631 ntBASIC7.96□□□□□ -1.14
NID1P14543 AC112230.1-201ENST00000604342 547 ntBASIC7.96□□□□□ -1.14
NID1P14543 AC024589.2-201ENST00000605642 1294 ntBASIC7.96□□□□□ -1.14
NID1P14543 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.96□□□□□ -1.14
NID1P14543 AC007497.1-201ENST00000610421 561 ntBASIC7.96□□□□□ -1.14
NID1P14543 AL450489.1-201ENST00000612071 468 ntBASIC7.96□□□□□ -1.14
NID1P14543 uc_338.3-201ENST00000613268 181 ntBASIC7.96□□□□□ -1.14
NID1P14543 AC122133.1-201ENST00000613964 233 ntBASIC7.96□□□□□ -1.14
NID1P14543 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
NID1P14543 GSTTP1-204ENST00000621179 920 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
NID1P14543 AC010223.1-201ENST00000625092 279 ntBASIC7.96□□□□□ -1.14
NID1P14543 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
NID1P14543 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
NID1P14543 CREBRF-205ENST00000522692 2466 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
NID1P14543 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
NID1P14543 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
NID1P14543 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
NID1P14543 AL590004.4-201ENST00000566733 7060 ntBASIC7.96□□□□□ -1.14
NID1P14543 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC7.96□□□□□ -1.14
NID1P14543 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC7.96□□□□□ -1.14
NID1P14543 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
NID1P14543 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
NID1P14543 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
NID1P14543 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms