Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RN7SKP211-201ENST00000363328 315 ntBASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 MTND3P20-201ENST00000407663 186 ntBASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 RPL5P28-201ENST00000418634 693 ntBASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 RN7SL58P-201ENST00000473445 294 ntBASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC079944.1-201ENST00000485426 495 ntBASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC243312.1-201ENST00000570582 275 ntBASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC012511.1-201ENST00000608140 449 ntBASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC023310.4-201ENST00000613130 650 ntBASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 pRNA.12-201ENST00000614353 90 ntBASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 pRNA.3-201ENST00000615048 90 ntBASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC018558.4-201ENST00000622153 281 ntBASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 AC073488.8-201ENST00000631952 757 ntBASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 VEZF1P1-201ENST00000423931 1541 ntBASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CDK5RAP1Q96SZ6 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 HSPD1P4-201ENST00000547203 1702 ntBASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 VN1R35P-201ENST00000428102 693 ntBASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 SNX18P9-201ENST00000440580 835 ntBASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 AL591379.2-201ENST00000450223 397 ntBASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 AL022319.1-201ENST00000458183 1167 ntBASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 AC139272.1-201ENST00000505516 640 ntBASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 FLJ46284-202ENST00000521148 496 ntTSL 3 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 MTND1P6-201ENST00000523621 946 ntBASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 AC126365.2-201ENST00000580630 379 ntBASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 AC007136.1-201ENST00000589141 199 ntBASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 OR5AH1P-201ENST00000595968 283 ntBASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 AC013731.1-201ENST00000604340 883 ntBASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 AC007342.9-201ENST00000623877 1385 ntBASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 AC087045.3-201ENST00000623046 2468 ntBASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.92□□□□□ -1.14
CDK5RAP1Q96SZ6 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDK5RAP1Q96SZ6 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms