Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 RNU1-38P-201ENST00000362817 144 ntBASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 RNA5SP396-201ENST00000364834 120 ntBASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 ARMCX7P-201ENST00000372828 562 ntBASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 MIR301B-201ENST00000390813 78 ntBASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 AC090680.1-201ENST00000464696 860 ntBASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 RN7SL145P-201ENST00000469955 296 ntBASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 AC084878.1-201ENST00000480555 648 ntBASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 AC105275.2-201ENST00000567907 711 ntBASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 AC143336.1-201ENST00000614164 836 ntBASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 MIR6731-201ENST00000614863 72 ntBASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 AL390882.1-201ENST00000618821 594 ntBASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 AC010886.1-201ENST00000437380 2869 ntBASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 AP003471.1-202ENST00000319051 1988 ntBASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 MFSD8-218ENST00000641186 4448 ntBASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 LRRC37A9P-201ENST00000603850 5376 ntBASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 OR51A10P-201ENST00000307165 937 ntBASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 RPL34P19-201ENST00000415903 342 ntBASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 Z83313.1-201ENST00000433780 718 ntBASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AC244505.2-201ENST00000435089 759 ntBASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AC019185.3-201ENST00000438805 323 ntBASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 FUNDC2P2-202ENST00000443452 493 ntBASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 GTF2F2P2-201ENST00000445825 721 ntBASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AC087257.2-201ENST00000538759 928 ntBASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 UBE2CP4-201ENST00000561405 535 ntBASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 ULK4P2-202ENST00000564187 492 ntBASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AL139123.1-201ENST00000612008 430 ntBASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AC022743.1-201ENST00000624990 664 ntBASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.87□□□□□ -1.31
C9orf40Q8IXQ3 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms