Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 AC006453.5-201ENST00000636451 619 ntBASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 AC087203.2-201ENST00000526502 1587 ntBASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 AC026464.2-201ENST00000567834 2421 ntBASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 MFSD8-218ENST00000641186 4448 ntBASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
TRIM48Q8IWZ4 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AC008937.3-201ENST00000606813 1700 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AL607077.1-201ENST00000401718 499 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 OR13Z1P-201ENST00000416141 834 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 MTCO1P57-201ENST00000432182 261 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 GAPDHP32-201ENST00000433816 998 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AL606752.1-201ENST00000435442 666 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 ATP5G1P6-201ENST00000451206 412 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 ZNF736P8Y-201ENST00000451913 669 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 HGF-207ENST00000453018 721 ntTSL 3 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AC107956.2-201ENST00000496042 454 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 UGT2B29P-201ENST00000509021 973 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AC138866.1-201ENST00000514522 497 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AC021001.1-201ENST00000518703 987 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AL356800.1-201ENST00000553339 735 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AC012414.2-201ENST00000559474 187 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AC106785.3-201ENST00000564064 847 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AC010323.2-201ENST00000596405 594 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AL137190.1-201ENST00000603288 282 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AL139317.4-201ENST00000605879 760 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AL021807.1-201ENST00000607175 565 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 SNORA35B-201ENST00000607417 129 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AF129408.1-201ENST00000608767 431 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 7SK.12-201ENST00000612820 244 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AL157359.3-201ENST00000623771 217 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AC097372.4-201ENST00000625025 466 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 SMG1P1-202ENST00000309865 4223 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 OR8G3P-203ENST00000641848 1344 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 PHF2P2-202ENST00000444553 2865 ntBASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM48Q8IWZ4 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AL365475.1-201ENST00000565135 1949 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AP001527.1-201ENST00000566440 1957 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 AP002364.1-201ENST00000623330 3386 ntBASIC7.68□□□□□ -1.18
TRIM48Q8IWZ4 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms