Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TMPRSS7-203ENST00000452346 2616 ntTSL 5 BASIC9.71□□□□□ -0.86
LRCH3Q96II8 GTF2H2B-204ENST00000513202 1954 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LRCH3Q96II8 BX005214.3-201ENST00000615174 1988 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LRCH3Q96II8 AMMECR1L-202ENST00000393001 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LRCH3Q96II8 KYNUP2-201ENST00000582280 1329 ntBASIC9.71□□□□□ -0.86
LRCH3Q96II8 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
LRCH3Q96II8 FMN1-207ENST00000559047 4260 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
LRCH3Q96II8 DHRS9-202ENST00000412271 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LRCH3Q96II8 DLEU1-234ENST00000491615 1451 ntTSL 5 BASIC9.71□□□□□ -0.86
LRCH3Q96II8 LAMA1-201ENST00000389658 9657 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LRCH3Q96II8 SPATA31E1-201ENST00000325643 4478 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LRCH3Q96II8 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
LRCH3Q96II8 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LRCH3Q96II8 AARS2-201ENST00000244571 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LRCH3Q96II8 PNPT1P1-201ENST00000450418 2315 ntBASIC9.71□□□□□ -0.86
LRCH3Q96II8 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LRCH3Q96II8 NLN-201ENST00000380985 8661 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LRCH3Q96II8 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LRCH3Q96II8 AASS-202ENST00000393376 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LRCH3Q96II8 SGK1-203ENST00000367857 2414 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LRCH3Q96II8 POLR2D-201ENST00000272645 5042 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LRCH3Q96II8 TUBB1-201ENST00000217133 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 SELENOT-207ENST00000615547 3488 ntTSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 AKAP12-202ENST00000354675 6287 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 GRIK1-207ENST00000399914 3624 ntTSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 MAGED1-204ENST00000375772 2701 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 CAB39L-212ENST00000610540 3692 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 CCDC33-203ENST00000398814 2787 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 CSF2RA-209ENST00000432318 1940 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 SOCS4-204ENST00000555846 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 TRPV1-207ENST00000572705 4166 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 ATP1B2-201ENST00000250111 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 MAPK10-368ENST00000641911 2238 ntAPPRIS P2 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 PPP1R2-206ENST00000618156 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 AKNAD1-201ENST00000369994 2318 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 IRF1-201ENST00000245414 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 AC113554.2-201ENST00000577647 4862 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 OR10G6-201ENST00000307002 999 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 OR51I2-201ENST00000341449 1070 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 AL672167.1-206ENST00000356293 943 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 RN7SKP1-201ENST00000365525 307 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 RACK1-201ENST00000376817 965 ntTSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 RCL1-201ENST00000381728 758 ntTSL 3 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 RNU6-157P-201ENST00000383957 107 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 RNU6-224P-201ENST00000384055 107 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 Y_RNA.578-201ENST00000390903 88 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 OOSP1-201ENST00000398992 1270 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 AC111200.2-201ENST00000418877 505 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 USP9YP9-201ENST00000429406 715 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 AL136529.1-201ENST00000430540 610 ntTSL 3 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 RPL5P26-201ENST00000438138 877 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 TSEN15P2-201ENST00000442453 358 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 COX6CP2-201ENST00000444980 225 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 FAR2P3-205ENST00000447059 604 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 HAUS6P3-201ENST00000456660 1107 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 RN7SL869P-201ENST00000497032 300 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 NDUFA5P12-201ENST00000503796 343 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 PCNAP1-201ENST00000505363 709 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 AC017007.1-201ENST00000511960 415 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 ADI1P2-201ENST00000514945 429 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 Y_RNA.701-201ENST00000516812 110 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 AC022832.1-201ENST00000530718 645 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 EIF4A3P1-201ENST00000578499 647 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 AC005034.4-201ENST00000603612 899 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 AC090950.1-201ENST00000604625 830 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 HINT1P2-201ENST00000604731 235 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 UBE2Q2P2-203ENST00000613592 761 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 MIR6774-201ENST00000614651 70 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 BSNDP3-201ENST00000617487 364 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 AC079684.1-201ENST00000621405 437 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 AC016542.3-201ENST00000623520 619 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 AL109806.1-201ENST00000623967 1248 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 TEX41-279ENST00000629149 609 ntTSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 OR8G3P-203ENST00000641848 1344 ntBASIC9.7□□□□□ -0.86
LRCH3Q96II8 LILRB4-204ENST00000391736 4002 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC9.7□□□□□ -0.86
LRCH3Q96II8 ZNF226-215ENST00000590089 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LRCH3Q96II8 SLC12A3-203ENST00000563236 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms