Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.77□□□□□ -1.33
FREM3P0C091 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
FREM3P0C091 AC108120.1-201ENST00000506543 991 ntBASIC6.77□□□□□ -1.33
FREM3P0C091 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC6.77□□□□□ -1.33
FREM3P0C091 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC6.77□□□□□ -1.33
FREM3P0C091 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.77□□□□□ -1.33
FREM3P0C091 MIR4437-201ENST00000581331 60 ntBASIC6.77□□□□□ -1.33
FREM3P0C091 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC6.77□□□□□ -1.33
FREM3P0C091 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.77□□□□□ -1.33
FREM3P0C091 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
FREM3P0C091 AL606490.2-201ENST00000457562 1330 ntBASIC6.77□□□□□ -1.33
FREM3P0C091 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FREM3P0C091 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FREM3P0C091 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FREM3P0C091 AC015871.4-201ENST00000624650 2260 ntBASIC6.77□□□□□ -1.33
FREM3P0C091 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
FREM3P0C091 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
FREM3P0C091 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 ITPK1-AS1-201ENST00000553639 4701 ntBASIC6.76□□□□□ -1.33
FREM3P0C091 AC105046.1-201ENST00000566457 4997 ntBASIC6.76□□□□□ -1.33
FREM3P0C091 WNK1-220ENST00000574564 1401 ntBASIC6.76□□□□□ -1.33
FREM3P0C091 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC6.76□□□□□ -1.33
FREM3P0C091 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 AL157698.1-201ENST00000415190 1011 ntBASIC6.76□□□□□ -1.33
FREM3P0C091 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC6.76□□□□□ -1.33
FREM3P0C091 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.76□□□□□ -1.33
FREM3P0C091 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.76□□□□□ -1.33
FREM3P0C091 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.76□□□□□ -1.33
FREM3P0C091 AC008620.1-201ENST00000468453 592 ntBASIC6.76□□□□□ -1.33
FREM3P0C091 AC079944.1-201ENST00000485426 495 ntBASIC6.76□□□□□ -1.33
FREM3P0C091 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.76□□□□□ -1.33
FREM3P0C091 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.76□□□□□ -1.33
FREM3P0C091 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC6.76□□□□□ -1.33
FREM3P0C091 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
FREM3P0C091 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
FREM3P0C091 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC6.76□□□□□ -1.33
FREM3P0C091 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.76□□□□□ -1.33
FREM3P0C091 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.76□□□□□ -1.33
FREM3P0C091 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.76□□□□□ -1.33
FREM3P0C091 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.76□□□□□ -1.33
FREM3P0C091 uc_338.37-201ENST00000620113 186 ntBASIC6.76□□□□□ -1.33
FREM3P0C091 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.76□□□□□ -1.33
FREM3P0C091 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC6.76□□□□□ -1.33
FREM3P0C091 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
FREM3P0C091 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC6.76□□□□□ -1.33
FREM3P0C091 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
FREM3P0C091 AL139327.1-201ENST00000382988 348 ntBASIC6.76□□□□□ -1.33
FREM3P0C091 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.76□□□□□ -1.33
FREM3P0C091 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC6.76□□□□□ -1.33
FREM3P0C091 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.76□□□□□ -1.33
FREM3P0C091 AC140479.1-201ENST00000440423 337 ntBASIC6.76□□□□□ -1.33
FREM3P0C091 AC123904.1-201ENST00000441072 368 ntBASIC6.76□□□□□ -1.33
FREM3P0C091 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 RN7SL870P-201ENST00000460111 296 ntBASIC6.76□□□□□ -1.33
FREM3P0C091 AC117395.2-201ENST00000463122 1128 ntBASIC6.76□□□□□ -1.33
FREM3P0C091 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.76□□□□□ -1.33
FREM3P0C091 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.76□□□□□ -1.33
FREM3P0C091 RN7SL697P-201ENST00000582484 299 ntBASIC6.76□□□□□ -1.33
FREM3P0C091 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
FREM3P0C091 RPS28P1-201ENST00000604589 187 ntBASIC6.76□□□□□ -1.33
FREM3P0C091 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.76□□□□□ -1.33
FREM3P0C091 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.76□□□□□ -1.33
FREM3P0C091 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC6.76□□□□□ -1.33
FREM3P0C091 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FREM3P0C091 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FREM3P0C091 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
FREM3P0C091 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC6.75□□□□□ -1.33
FREM3P0C091 AL353795.1-201ENST00000439134 1775 ntBASIC6.75□□□□□ -1.33
FREM3P0C091 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FREM3P0C091 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FREM3P0C091 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.75□□□□□ -1.33
FREM3P0C091 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
FREM3P0C091 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
FREM3P0C091 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
FREM3P0C091 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FREM3P0C091 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
FREM3P0C091 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
FREM3P0C091 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
FREM3P0C091 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
FREM3P0C091 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
FREM3P0C091 MITF-203ENST00000328528 4680 ntTSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms