Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.82■□□□□ 0.12
S4R3C0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
S4R3C0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
S4R3C0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
S4R3C0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
S4R3C0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.82■□□□□ 0.12
S4R3C0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
S4R3C0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
S4R3C0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
S4R3C0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
S4R3C0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.82■□□□□ 0.12
S4R3C0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.81■□□□□ 0.12
S4R3C0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
S4R3C0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
S4R3C0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
S4R3C0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
S4R3C0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
S4R3C0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
S4R3C0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
S4R3C0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
S4R3C0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
S4R3C0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
S4R3C0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
S4R3C0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
S4R3C0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.81■□□□□ 0.12
S4R3C0 AC093787.1-201ENST00000450396 207 ntBASIC15.81■□□□□ 0.12
S4R3C0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
S4R3C0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.81■□□□□ 0.12
S4R3C0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.81■□□□□ 0.12
S4R3C0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.81■□□□□ 0.12
S4R3C0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
S4R3C0 AC069236.1-201ENST00000604339 616 ntBASIC15.81■□□□□ 0.12
S4R3C0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
S4R3C0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
S4R3C0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
S4R3C0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
S4R3C0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.8■□□□□ 0.12
S4R3C0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
S4R3C0 AL162377.1-201ENST00000618844 1793 ntBASIC15.8■□□□□ 0.12
S4R3C0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.8■□□□□ 0.12
S4R3C0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.8■□□□□ 0.12
S4R3C0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 AC087633.2-202ENST00000565166 1439 ntBASIC15.8■□□□□ 0.12
S4R3C0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.8■□□□□ 0.12
S4R3C0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.8■□□□□ 0.12
S4R3C0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 CDCA4P2-201ENST00000441182 718 ntBASIC15.8■□□□□ 0.12
S4R3C0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.8■□□□□ 0.12
S4R3C0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.8■□□□□ 0.12
S4R3C0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.8■□□□□ 0.12
S4R3C0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.8■□□□□ 0.12
S4R3C0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
S4R3C0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
S4R3C0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
S4R3C0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.8■□□□□ 0.12
S4R3C0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
S4R3C0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
S4R3C0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S4R3C0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S4R3C0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
S4R3C0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S4R3C0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S4R3C0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
S4R3C0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
S4R3C0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
S4R3C0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S4R3C0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.79■□□□□ 0.12
S4R3C0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S4R3C0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
S4R3C0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
S4R3C0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
S4R3C0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S4R3C0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.79■□□□□ 0.12
S4R3C0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.79■□□□□ 0.12
S4R3C0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S4R3C0 MIR663A-201ENST00000385250 93 ntBASIC15.79■□□□□ 0.12
S4R3C0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.79■□□□□ 0.12
S4R3C0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
S4R3C0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
S4R3C0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
S4R3C0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.79■□□□□ 0.12
S4R3C0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
S4R3C0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.79■□□□□ 0.12
S4R3C0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
S4R3C0 AC092666.2-201ENST00000613287 246 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms